RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RPS23P62266 143 aaKnown RBP9.01□□□□□ -0.97
CHFR-219ENST00000541341 IL24Q13007 206 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 TMEM187Q14656 261 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 SLC22A6Q4U2R8 563 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 TMEM211Q6ICI0 200 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 FAM180AQ6UWF9 173 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 RBMS3Q6XE24 437 aaKnown RBP9.01□□□□□ -0.97
CHFR-219ENST00000541341 ZNF429Q86V71 674 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 MCEMP1Q8IX19 187 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 H1FOOQ8IZA3 346 aaPredicted RBP9.01□□□□□ -0.97
CHFR-219ENST00000541341 OR2C3Q8N628 320 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 OR2G3Q8NGZ4 309 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 RTN4IP1Q8WWV3 396 aaPredicted RBP9.01□□□□□ -0.97
CHFR-219ENST00000541341 GTF3AQ92664 365 aaKnown RBP9.01□□□□□ -0.97
CHFR-219ENST00000541341 PPP1R14AQ96A00 147 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 S100PBPQ96BU1 408 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 C18orf12Q96KH6 178 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 IMMP1LQ96LU5 166 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 C1orf147Q96MC9 270 aaPredicted RBP9.01□□□□□ -0.97
CHFR-219ENST00000541341 PTGES2Q9H7Z7 377 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 ZNF701Q9NV72 531 aaPredicted RBP9.01□□□□□ -0.97
CHFR-219ENST00000541341 IL36GQ9NZH8 169 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 V9GYS6 101 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 GTF3C1Q12789 2109 aa9.01□□□□□ -0.97
CHFR-219ENST00000541341 OTOGQ6ZRI0 2925 aa9□□□□□ -0.97
CHFR-219ENST00000541341 TRBV24-1A0A075B6N3 115 aa9□□□□□ -0.97
CHFR-219ENST00000541341 A0A087WZY1 265 aa9□□□□□ -0.97
CHFR-219ENST00000541341 TRGV8A0A0C4DH27 118 aa9□□□□□ -0.97
CHFR-219ENST00000541341 ZNHIT1O43257 154 aa9□□□□□ -0.97
CHFR-219ENST00000541341 SOX15O60248 233 aa9□□□□□ -0.97
CHFR-219ENST00000541341 NME2P1O60361 137 aa9□□□□□ -0.97
CHFR-219ENST00000541341 IFNA5P01569 189 aa9□□□□□ -0.97
CHFR-219ENST00000541341 CBR1P16152 277 aa9□□□□□ -0.97
CHFR-219ENST00000541341 PTGER4P35408 488 aa9□□□□□ -0.97
CHFR-219ENST00000541341 NDUFA6P56556 154 aa9□□□□□ -0.97
CHFR-219ENST00000541341 SOX8P57073 446 aa9□□□□□ -0.97
CHFR-219ENST00000541341 ZNF121P58317 390 aaPredicted RBP9□□□□□ -0.97
CHFR-219ENST00000541341 OR2B8PP59922 312 aa9□□□□□ -0.97
CHFR-219ENST00000541341 ARG2P78540 354 aa9□□□□□ -0.97
CHFR-219ENST00000541341 HLA-DRB3P79483 266 aa9□□□□□ -0.97
CHFR-219ENST00000541341 PMP22Q01453 160 aa9□□□□□ -0.97
CHFR-219ENST00000541341 SSX2Q16385 188 aa9□□□□□ -0.97
CHFR-219ENST00000541341 EXT1Q16394 746 aa9□□□□□ -0.97
CHFR-219ENST00000541341 ACER2Q5QJU3 275 aa9□□□□□ -0.97
CHFR-219ENST00000541341 SLC25A47Q6Q0C1 308 aa9□□□□□ -0.97
CHFR-219ENST00000541341 Q6ZS49 121 aa9□□□□□ -0.97
CHFR-219ENST00000541341 LHFPL2Q6ZUX7 228 aa9□□□□□ -0.97
CHFR-219ENST00000541341 GALNTL5Q7Z4T8 443 aa9□□□□□ -0.97
CHFR-219ENST00000541341 TGIF2LYQ8IUE0 185 aa9□□□□□ -0.97
CHFR-219ENST00000541341 LINC00346Q8IVM7 164 aa9□□□□□ -0.97
CHFR-219ENST00000541341 FOXRED2Q8IWF2 684 aa9□□□□□ -0.97
CHFR-219ENST00000541341 ZNF441Q8N8Z8 693 aa9□□□□□ -0.97
CHFR-219ENST00000541341 APCDD1LQ8NCL9 501 aa9□□□□□ -0.97
CHFR-219ENST00000541341 FAM213BQ8TBF2 198 aa9□□□□□ -0.97
CHFR-219ENST00000541341 PINX1Q96BK5 328 aaKnown RBP9□□□□□ -0.97
CHFR-219ENST00000541341 ACY3Q96HD9 319 aa9□□□□□ -0.97
CHFR-219ENST00000541341 RCC1LQ96I51 464 aaKnown RBP9□□□□□ -0.97
CHFR-219ENST00000541341 LURAP1Q96LR2 239 aa9□□□□□ -0.97
CHFR-219ENST00000541341 YPEL4Q96NS1 127 aa9□□□□□ -0.97
CHFR-219ENST00000541341 GNRHR2Q96P88 292 aa9□□□□□ -0.97
CHFR-219ENST00000541341 TAAR6Q96RI8 345 aa9□□□□□ -0.97
CHFR-219ENST00000541341 C2orf88Q9BSF0 95 aa9□□□□□ -0.97
CHFR-219ENST00000541341 SCRT1Q9BWW7 348 aa9□□□□□ -0.97
CHFR-219ENST00000541341 BCL2L14Q9BZR8 327 aa9□□□□□ -0.97
CHFR-219ENST00000541341 RIMS4Q9H426 269 aaPredicted RBP9□□□□□ -0.97
CHFR-219ENST00000541341 DOK5Q9P104 306 aa9□□□□□ -0.97
CHFR-219ENST00000541341 MMP24Q9Y5R2 645 aa9□□□□□ -0.97
CHFR-219ENST00000541341 PUS1Q9Y606 427 aaKnown RBP eCLIP9□□□□□ -0.97
CHFR-219ENST00000541341 EML6Q6ZMW3 1958 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 hCG_1809904A0A1W2PP81 198 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 A0A1W2PR64 198 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 A0A1W2PRV1 198 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 M0QZK8 103 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 SLC31A2O15432 143 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 GGCTO75223 188 aaKnown RBP8.99□□□□□ -0.97
CHFR-219ENST00000541341 WISP2O76076 250 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 SCGB1D2O95969 90 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 CYB5R3P00387 301 aaPredicted RBP8.99□□□□□ -0.97
CHFR-219ENST00000541341 IGLV3-1P01715 115 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 HPNP05981 417 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 ZNF43P17038 809 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 GABRR1P24046 479 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 DDTP30046 118 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 CCKARP32238 428 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 NKX2-1P43699 371 aaPredicted RBP8.99□□□□□ -0.97
CHFR-219ENST00000541341 OR3A4PP47883 348 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 RND2P52198 227 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 RPL23AP62750 156 aaKnown RBP8.99□□□□□ -0.97
CHFR-219ENST00000541341 SERF2P84101 59 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 OR2A2Q6IF42 318 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 GFRALQ6UXV0 394 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 FAM219AQ8IW50 185 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 FBXL14Q8N1E6 418 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 TMEM104Q8NE00 496 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 OR8B12Q8NGG6 310 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 SLAMF9Q96A28 289 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 MOB3AQ96BX8 217 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 PIGQQ9BRB3 760 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 RSRP1Q9BUV0 290 aa8.99□□□□□ -0.97
CHFR-219ENST00000541341 LYRM2Q9NU23 88 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms