RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 OR2M5A3KFT3 312 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 HIST1H1EP10412 219 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 ACAA2P42765 397 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 EIF4EBP2Q13542 120 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 OR1C1Q15619 314 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 LPAL2Q16609 132 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 ANKRD37Q7Z713 158 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 SGMS2Q8NHU3 365 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 CDC42EP3Q9UKI2 254 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 OR13G1Q8NGZ3 307 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 DEFB127Q9H1M4 99 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 SRD5A3Q9H8P0 318 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 OR2J3O76001 311 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 OR3A1P47881 315 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 LAMTOR1Q6IAA8 161 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 TMEM252Q8N6L7 170 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 ADAT3Q96EY9 351 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 A0A1W2PPV9 198 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 IFITM10A6NMD0 228 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 CYR61O00622 381 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 CA6P23280 308 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 TCL1AP56279 114 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 PSG5Q15238 335 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 D2HGDHQ8N465 521 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 AQP3Q92482 292 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 RHOVQ96L33 236 aa13.14□□□□□ -0.31
SMARCA4-207ENST00000541122 CNTRLQ7Z7A1 2325 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 OOEPA6NGQ2 149 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 P01737 135 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 IFI6P09912 130 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 RPS4XP62701 263 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 C12orf54Q6X4T0 127 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 OR10AD1Q8NGE0 317 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 OR2T8A6NH00 312 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 NCBP2LA6PVI3 153 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 CORTO00230 105 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 MEF2BQ02080 365 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 ROM1Q03395 351 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 SPATA46Q5T0L3 261 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 MRPL54Q6P161 138 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 STXBP6Q8NFX7 210 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 HSPB9Q9BQS6 159 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 ZPBPQ9BS86 351 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 P4HTMQ9NXG6 502 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 KLHDC2Q9Y2U9 406 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 SIT1Q9Y3P8 196 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 CD74P04233 296 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 CST9Q5W186 159 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 OR4P4Q8NGL7 312 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 PTPMT1Q8WUK0 201 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 HSD17B10Q99714 261 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 CDK5RAP2Q96SN8 1893 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 SIGLEC5O15389 551 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 DANCRP0C864 163 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 CTGFP29279 349 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 SIGLEC14Q08ET2 396 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 VSTM2AQ8TAG5 236 aa13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 CISD1Q9NZ45 108 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-207ENST00000541122 IL2RAP01589 272 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 PNLIPP16233 465 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 SRD5A2P31213 254 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 FZD5Q13467 585 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 LILRA6Q6PI73 481 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 DHRS13Q6UX07 377 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 UBALD1Q8TB05 177 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 MOB3AQ96BX8 217 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 GPR61Q9BZJ8 451 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 OR6C3Q9NZP0 311 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 P2RY4P51582 365 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 TEX30Q5JUR7 227 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 LINC00469Q8N7U9 141 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 ISG15P05161 165 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 FAM157CP0CG43 387 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 PCP4P48539 62 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 ZP4Q12836 540 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 OR4A47Q6IF82 309 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 LYG1Q8N1E2 194 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 BLNKQ8WV28 456 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 LY75O60449 1722 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 DOCK1Q14185 1865 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 TNFRSF1AP19438 455 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 C1QL3Q5VWW1 255 aa13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 SEBOXQ9HB31 216 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-207ENST00000541122 M0R1B8 84 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 MPDU1O75352 247 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 RHBDL1O75783 438 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 FCGR3AP08637 254 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 S100A4P26447 101 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 CD82P27701 267 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 GLIPR1P48060 266 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 TAS2R60P59551 318 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 ZAR1Q86SH2 424 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 OR1L3Q8NH93 324 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 MRGPRFQ96AM1 343 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 GSN-AS1Q9NRJ2 163 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 TMEM38BQ9NVV0 291 aa13.11□□□□□ -0.31
SMARCA4-207ENST00000541122 SH3BGRL2Q9UJC5 107 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms