RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 DHRS11Q6UWP2 260 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 OR6F1Q8NGZ6 308 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 NCOR1P1Q9H4R4 102 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 TRAPPC2LQ9UL33 140 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 HRNRQ86YZ3 2850 aaPredicted RBP14.81□□□□□ -0.04
CLIP1-215ENST00000541108 hCG_2014768A0A024R1R8 64 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 CEACAM18A8MTB9 384 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 J3QKU1 62 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 ZNF205O95201 554 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 TK1P04183 234 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 GSTT2P0CG29 244 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 OR5H8P0DN80 308 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 AESQ08117 197 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 ZNRF1Q8ND25 227 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 DEFB108BQ8NET1 73 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 OR13C8Q8NGS7 320 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 COQ2Q96H96 371 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 MED30Q96HR3 178 aa14.81□□□□□ -0.04
CLIP1-215ENST00000541108 CLEC4MQ9H2X3 399 aaPredicted RBP14.81□□□□□ -0.04
CLIP1-215ENST00000541108 MYOZ1Q9NP98 299 aaPredicted RBP14.81□□□□□ -0.04
CLIP1-215ENST00000541108 FUOMA2VDF0 154 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 SDCBPO00560 298 aaPredicted RBP14.8□□□□□ -0.04
CLIP1-215ENST00000541108 TNFRSF13BO14836 293 aaPredicted RBP14.8□□□□□ -0.04
CLIP1-215ENST00000541108 SIGLEC5O15389 551 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 FABP7O15540 132 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 PEX14O75381 377 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 DIRAS3O95661 229 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 CLDN1O95832 211 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 TFF1P04155 84 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 RCC1P18754 421 aaPredicted RBP14.8□□□□□ -0.04
CLIP1-215ENST00000541108 COL8A2P25067 703 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 TATDN3Q17R31 274 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 KRBOX4Q5JUW0 171 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 SP5Q6BEB4 398 aaPredicted RBP14.8□□□□□ -0.04
CLIP1-215ENST00000541108 ZNF554Q86TJ5 538 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 LHFPL1Q86WI0 220 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 OR4A4PQ8NGN8 299 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 PLEKHF2Q9H8W4 249 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 PCDHB10Q9UN67 800 aa14.8□□□□□ -0.04
CLIP1-215ENST00000541108 GYPAP02724 150 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 ERP29P30040 261 aaKnown RBP14.79□□□□□ -0.04
CLIP1-215ENST00000541108 ECI1P42126 302 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 BCAP31P51572 246 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 IL13RA1P78552 427 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 ZNF660Q6AZW8 331 aaPredicted RBP14.79□□□□□ -0.04
CLIP1-215ENST00000541108 SLC36A1Q7Z2H8 476 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 PEG10Q86TG7 708 aaKnown RBP14.79□□□□□ -0.04
CLIP1-215ENST00000541108 ZDHHC22Q8N966 263 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 GIMAP1Q8WWP7 306 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 SCGB3A2Q96PL1 93 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 GAFA1Q96PS6 74 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 ALX4Q9H161 411 aaPredicted RBP14.79□□□□□ -0.04
CLIP1-215ENST00000541108 KAAG1Q9UBP8 84 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 KIF25Q9UIL4 384 aa14.79□□□□□ -0.04
CLIP1-215ENST00000541108 NKX6-3A6NJ46 265 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 ARPC1BO15143 372 aaKnown RBP14.78□□□□□ -0.04
CLIP1-215ENST00000541108 PRAF2O60831 178 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 RP2O75695 350 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 SCTP09683 121 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 COX6B1P14854 86 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 HLA-DRB3P79483 266 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 SURF2Q15527 256 aaPredicted RBP14.78□□□□□ -0.04
CLIP1-215ENST00000541108 TRAT1Q6PIZ9 186 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 CADM3Q8N126 398 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 CCDC107Q8WV48 283 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 CCL13Q99616 98 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 ING3Q9NXR8 418 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 KCNIP1Q9NZI2 227 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 OPN4Q9UHM6 478 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 FLVCR2Q9UPI3 526 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 LRBAP50851 2863 aa14.78□□□□□ -0.04
CLIP1-215ENST00000541108 MEIKINA0A087WXM9 373 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 OVOL3O00110 214 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 TMPRSS2O15393 492 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 RAB25P57735 213 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 CR1LQ2VPA4 569 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 C6orf183Q5T699 404 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 AADACL3Q5VUY0 350 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 ZNF565Q8N9K5 539 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 MRGPRFQ96AM1 343 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 LURAP1Q96LR2 239 aa14.77□□□□□ -0.04
CLIP1-215ENST00000541108 A0A0B4J293 547 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 F12P00748 615 aaPredicted RBP14.77□□□□□ -0.05
CLIP1-215ENST00000541108 DAOP14920 347 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 GZMHP20718 246 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 GLP1RP43220 463 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 GLIPR1P48060 266 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 P2RX3P56373 397 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 HMGN3Q15651 99 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 IGSF11Q5DX21 431 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 IGFBPL1Q8WX77 278 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 ZNF2Q9BSG1 426 aaPredicted RBP14.77□□□□□ -0.05
CLIP1-215ENST00000541108 CABLES2Q9BTV7 478 aa14.77□□□□□ -0.05
CLIP1-215ENST00000541108 C7orf66A4D0T2 115 aa14.76□□□□□ -0.05
CLIP1-215ENST00000541108 NPIPB11E5RHQ5 1161 aa14.76□□□□□ -0.05
CLIP1-215ENST00000541108 TMEM33P57088 247 aa14.76□□□□□ -0.05
CLIP1-215ENST00000541108 SEC61A1P61619 476 aaKnown RBP14.76□□□□□ -0.05
CLIP1-215ENST00000541108 HERPUD1Q15011 391 aa14.76□□□□□ -0.05
CLIP1-215ENST00000541108 TMEM185AQ8NFB2 350 aa14.76□□□□□ -0.05
CLIP1-215ENST00000541108 TMEM246Q9BRR3 403 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms