RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 NKAPLQ5M9Q1 402 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 OR2T2Q6IF00 324 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 HAGHLQ6PII5 290 aaPredicted RBP7.06□□□□□ -1.28
CHD4-208ENST00000540960 C1QL2Q7Z5L3 287 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 SLC25A42Q86VD7 318 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 FAM185AQ8N0U4 392 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 FAM58AQ8N1B3 248 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 ZBTB8BQ8NAP8 495 aaPredicted RBP7.06□□□□□ -1.28
CHD4-208ENST00000540960 COQ8AQ8NI60 647 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 PPP1R35Q8TAP8 253 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 FAM216AQ8WUB2 273 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 NUDCD2Q8WVJ2 157 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 FBXW5Q969U6 566 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 ERGIC1Q969X5 290 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 MARS2Q96GW9 593 aaKnown RBP7.06□□□□□ -1.28
CHD4-208ENST00000540960 NICN1Q9BSH3 213 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 ADAT1Q9BUB4 502 aaKnown RBP7.06□□□□□ -1.28
CHD4-208ENST00000540960 ST6GALNAC5Q9BVH7 336 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 OR2J1Q9GZK6 312 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 KCNK15Q9H427 330 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 POFUT1Q9H488 388 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 ZMAT3Q9HA38 289 aaKnown RBP7.06□□□□□ -1.28
CHD4-208ENST00000540960 CHMP1AQ9HD42 196 aaPredicted RBP7.06□□□□□ -1.28
CHD4-208ENST00000540960 ANXA10Q9UJ72 324 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 ZNF222Q9UK12 451 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 KCNIP3Q9Y2W7 256 aa7.06□□□□□ -1.28
CHD4-208ENST00000540960 IGKV1-27A0A075B6S5 117 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 A0A0A6YYD4 124 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 TRBV6-6A0A0A6YYG2 114 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 IGHV2OR16-5A0A0B4J2B6 119 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 A0A1B0GWJ7 208 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 ZNF503-AS2A6NEH8 195 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 DEGS1O15121 323 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 ANGPTL7O43827 346 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 SSX5O60225 188 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 B3GALNT1O75752 331 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 PLATP00750 562 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 TK1P04183 234 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 THBDP07204 575 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 ZNF735P0CB33 412 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 CA6P23280 308 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 CALCRP30988 508 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 GZMKP49863 264 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 KLF3P57682 345 aaPredicted RBP7.05□□□□□ -1.28
CHD4-208ENST00000540960 SRPXP78539 464 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 CARTPTQ16568 116 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 NDUFA5Q16718 116 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 ZNF474Q6S9Z5 364 aaPredicted RBP7.05□□□□□ -1.28
CHD4-208ENST00000540960 OVCH2Q7RTZ1 564 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 SLC36A1Q7Z2H8 476 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 C12orf45Q8N5I9 185 aaPredicted RBP7.05□□□□□ -1.28
CHD4-208ENST00000540960 CCDC71LQ8N9Z2 235 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 TMEM185AQ8NFB2 350 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 NUP37Q8NFH4 326 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 OR10AD1Q8NGE0 317 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 OR10K1Q8NGX5 313 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 OR10Z1Q8NGY1 313 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 GRPEL2Q8TAA5 225 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 NEK7Q8TDX7 302 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 HPSE2Q8WWQ2 592 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 S100PBPQ96BU1 408 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 ZNF486Q96H40 463 aaPredicted RBP7.05□□□□□ -1.28
CHD4-208ENST00000540960 SLC6A7Q99884 636 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 GON7Q9BXV9 100 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 ZNF436Q9C0F3 470 aaPredicted RBP7.05□□□□□ -1.28
CHD4-208ENST00000540960 TINAGL1Q9GZM7 467 aaPredicted RBP7.05□□□□□ -1.28
CHD4-208ENST00000540960 ZFP57Q9NU63 452 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 EHFQ9NZC4 300 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 RCC2Q9P258 522 aaKnown RBP7.05□□□□□ -1.28
CHD4-208ENST00000540960 NPTNQ9Y639 398 aa7.05□□□□□ -1.28
CHD4-208ENST00000540960 A0A0B4J293 547 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 IGHV1-18A0A0C4DH31 117 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 MEIS3P1A6NDR6 274 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 IFNL4K9M1U5 179 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 M0QYG6 137 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 M0R1B8 84 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 GEMIN2O14893 280 aaKnown RBP7.04□□□□□ -1.28
CHD4-208ENST00000540960 OR2A4O95047 310 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 NXPH2O95156 264 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 DUS4LO95620 317 aaKnown RBP7.04□□□□□ -1.28
CHD4-208ENST00000540960 IGHV3-13P01766 116 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 OR4E1P0C645 316 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 PTHLHP12272 177 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 ZNF250P15622 560 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 PRKACAP17612 351 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 HLA-GP17693 338 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 ANXA7P20073 488 aaKnown RBP7.04□□□□□ -1.28
CHD4-208ENST00000540960 CD34P28906 385 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 CFHR2P36980 270 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 UCP3P55916 312 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 HERV-K104P61576 105 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 IL13RA1P78552 427 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 PSG7Q13046 419 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 IKZF1Q13422 519 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 FCN2Q15485 313 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 NKPD1Q17RQ9 610 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 MICBQ29980 383 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 SMIM21Q3B7S5 101 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 TRAT1Q6PIZ9 186 aa7.04□□□□□ -1.28
CHD4-208ENST00000540960 CRIP3Q6Q6R5 217 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms