RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 AANATQ16613 207 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 SIGIRRQ6IA17 410 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 SLC35E4Q6ICL7 350 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 OR5R1Q8NH85 324 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 MRGPRDQ8TDS7 321 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 FAM46BQ96A09 425 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 FOXRED1Q96CU9 486 aaPredicted RBP13.67□□□□□ -0.22
CD9-209ENST00000540891 CLEC7AQ9BXN2 247 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 YTHDF1Q9BYJ9 559 aaKnown RBP13.67□□□□□ -0.22
CD9-209ENST00000540891 SELENOIQ9C0D9 397 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 LINC00574Q9H8X3 128 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 CALYQ9NYX4 217 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 GHRLQ9UBU3 117 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 KIAA2026Q5HYC2 2103 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 TENM1Q9UKZ4 2725 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 A0A087X0M5 115 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 A0A1B0GX30 115 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 NPIPB11E5RHQ5 1161 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 SLC22A1O15245 554 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 CRTAPO75718 401 aaPredicted RBP13.66□□□□□ -0.22
CD9-209ENST00000540891 NDUFA7O95182 113 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 VSIG8P0DPA2 414 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 CD34P28906 385 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 RPL15P61313 204 aaKnown RBP13.66□□□□□ -0.22
CD9-209ENST00000540891 LRRC75BQ2VPJ9 315 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 UBE2UQ5VVX9 321 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 OR52W1Q6IF63 320 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 OR10K2Q6IF99 312 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 ABHD12Q8N2K0 398 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 SVOPQ8N4V2 548 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 ZNF565Q8N9K5 539 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 OR4P4Q8NGL7 312 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 MALSU1Q96EH3 234 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 KIRREL1Q96J84 757 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 KCNK15Q9H427 330 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 ZNF286AQ9HBT8 521 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 NDUFB11Q9NX14 153 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 LRRC42Q9Y546 428 aa13.66□□□□□ -0.22
CD9-209ENST00000540891 SHISA3A0PJX4 238 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 TMEM30CPA0ZSE6 113 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A10PA6NDY2 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 BTBD17A6NE02 478 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A18PA6NE21 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A16PA6NEW6 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A20PA6NIJ5 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A7PA6NKC0 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 VGLL3A8MV65 326 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A22PA8MWA6 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A12PA8MX19 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A5PA8MXJ8 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A23PA8MXZ1 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 ARL6IP5O75915 188 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 IL1AP01583 271 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 IGLV1-47P01700 117 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 CRYBA1P05813 215 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A15PP0C7V4 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A13PP0C7W8 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A14PP0C7W9 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 FAM90A24PP0C7X0 464 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 UBBP0CG47 229 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 JUNBP17275 347 aaPredicted RBP13.65□□□□□ -0.22
CD9-209ENST00000540891 CALRP27797 417 aaKnown RBP13.65□□□□□ -0.22
CD9-209ENST00000540891 HTR2CP28335 458 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 SSTR5P35346 364 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 RAG2P55895 527 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 QRFPP83859 136 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 UNC119Q13432 240 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 SSX2Q16385 188 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 MINOS1Q5TGZ0 78 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 CD200R1LQ6Q8B3 271 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 GDPGP1Q6ZNW5 385 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 C3orf56Q8N813 242 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 SLITRK2Q9H156 845 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 SPACA1Q9HBV2 294 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 AK6Q9Y3D8 172 aaKnown RBP13.65□□□□□ -0.22
CD9-209ENST00000540891 MMP24Q9Y5R2 645 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 MINOS1-NBL1R4GNA1 71 aa13.65□□□□□ -0.22
CD9-209ENST00000540891 MPIG6BO95866 241 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 MT-ND4P03905 459 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 LY6EQ16553 131 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 PLA1AQ53H76 456 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 RAB12Q6IQ22 244 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 ZNF497Q6ZNH5 498 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 RTN4RL2Q86UN3 420 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 OR6M1Q8NGM8 313 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 ZNF747Q9BV97 191 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 CST11Q9H112 138 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 IDI2-AS1Q9NZ38 188 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 PEX16Q9Y5Y5 336 aa13.64□□□□□ -0.23
CD9-209ENST00000540891 TMEM14DPA8MWL7 114 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 MCRIP1C9JLW8 97 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 C15orf65H3BRN8 121 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 HTR1DP28221 377 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 RAB13P51153 203 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 FAM189A2Q15884 450 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 ZNF773Q6PK81 442 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 Q6ZSV7 163 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 GAPTQ8N292 157 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 OR4F5Q8NH21 305 aa13.63□□□□□ -0.23
CD9-209ENST00000540891 RFESDQ8TAC1 157 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms