RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 OR51D1Q8NGF3 324 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 OR51A2Q8NGJ7 313 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 RFESDQ8TAC1 157 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 MRGPRDQ8TDS7 321 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 TNFAIP8L1Q8WVP5 186 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 CPNE2Q96FN4 548 aaPredicted RBP11.19□□□□□ -0.62
SNHG1-213ENST00000540725 GPER1Q99527 375 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 AMBNQ9NP70 447 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 ERVK13-1Q9NX77 482 aa11.19□□□□□ -0.62
SNHG1-213ENST00000540725 NPIPB11E5RHQ5 1161 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 H3BNX3 289 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 MAGEB3O15480 346 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
SNHG1-213ENST00000540725 KCNJ3P48549 501 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 GNG10P50151 68 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 RAB7AP51149 207 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 GBX2P52951 348 aaPredicted RBP11.18□□□□□ -0.62
SNHG1-213ENST00000540725 RPL23AP62750 156 aaKnown RBP11.18□□□□□ -0.62
SNHG1-213ENST00000540725 PAX5Q02548 391 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 EGFEM1PQ0D2K5 195 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 HNF4GQ14541 408 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 PIGYQ3MUY2 71 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 DEFB121Q5J5C9 76 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 VAX1Q5SQQ9 334 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 ZNF529Q6P280 563 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 MRPL41Q8IXM3 137 aaKnown RBP11.18□□□□□ -0.62
SNHG1-213ENST00000540725 OR8H3Q8N146 312 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 OR10K1Q8NGX5 313 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 HAVCR2Q8TDQ0 301 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 CHPT1Q8WUD6 406 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 NOL4LQ96MY1 436 aaPredicted RBP11.18□□□□□ -0.62
SNHG1-213ENST00000540725 GPR61Q9BZJ8 451 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 FAM192AQ9GZU8 254 aa11.18□□□□□ -0.62
SNHG1-213ENST00000540725 TRAV39A0A0B4J263 110 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 FGF16O43320 207 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 MPZL2O60487 215 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 SSTR5P35346 364 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 SOX2P48431 317 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 THBS3P49746 956 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 RAB40BQ12829 278 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 RSU1Q15404 277 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 C11orf87Q6NUJ2 197 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 SLC16A12Q6ZSM3 486 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 OR2W3Q7Z3T1 314 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 Q8NFD4 153 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 OR10A7Q8NGE5 316 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 OR10X1Q8NGY0 326 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 RHOXF1Q8NHV9 184 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 RGP1Q92546 391 aaPredicted RBP11.17□□□□□ -0.62
SNHG1-213ENST00000540725 DPF1Q92782 380 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 Q96MT0 163 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 JAM3Q9BX67 310 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 TAS2R4Q9NYW5 299 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 LINC00527Q9UJ94 153 aa11.17□□□□□ -0.62
SNHG1-213ENST00000540725 A0A1W2PPE3 182 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 SERPINE3A8MV23 424 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 HTR3BO95264 441 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 GTF2A1P52655 376 aaPredicted RBP11.16□□□□□ -0.62
SNHG1-213ENST00000540725 ZFP1Q6P2D0 407 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 ASCL4Q6XD76 172 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 C18orf65Q6ZTR6 163 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 C8orf86Q6ZUL3 223 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 OR52I1Q8NGK6 324 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 DPCDQ9BVM2 203 aaPredicted RBP11.16□□□□□ -0.62
SNHG1-213ENST00000540725 ZNF581Q9P0T4 197 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 NUDT19A8MXV4 375 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 HSD17B6O14756 317 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 CDRT1O95170 752 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 IGHG2P01859 326 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 CD2P06729 351 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 LIMS3P0CW19 117 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 LIMS4P0CW20 117 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 SLC6A1P30531 599 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 SLC35E3Q7Z769 313 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 SUMF2Q8NBJ7 301 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 KLHL30-AS1Q8NEE0 82 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 GPR148Q8TDV2 347 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 ZFP57Q9NU63 452 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 MRPS18AQ9NVS2 196 aaKnown RBP11.16□□□□□ -0.62
SNHG1-213ENST00000540725 FAM118AQ9NWS6 357 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 ST3GAL6Q9Y274 331 aa11.16□□□□□ -0.62
SNHG1-213ENST00000540725 RPL36Q9Y3U8 105 aaKnown RBP11.16□□□□□ -0.62
SNHG1-213ENST00000540725 OR7C1O76099 320 aaPredicted RBP11.15□□□□□ -0.63
SNHG1-213ENST00000540725 RBM11P57052 281 aaKnown RBP11.15□□□□□ -0.63
SNHG1-213ENST00000540725 SLC35B1P78383 322 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 ZNF816Q0VGE8 651 aaPredicted RBP11.15□□□□□ -0.63
SNHG1-213ENST00000540725 KLHL22Q53GT1 634 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 NHLRC3Q5JS37 347 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 XAF1Q6GPH4 301 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 MOB3BQ86TA1 216 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 FOXRED2Q8IWF2 684 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 STPG2Q8N412 459 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 COMMD1Q8N668 190 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 TMEM106AQ96A25 262 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 MCRIP2Q9BUT9 160 aaKnown RBP11.15□□□□□ -0.63
SNHG1-213ENST00000540725 C9orf16Q9BUW7 83 aa11.15□□□□□ -0.63
SNHG1-213ENST00000540725 METTL9Q9H1A3 318 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms