RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, human

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-208	ENST00000540700	GDPD3	Q7L5L3	318 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700	C5orf24	Q7Z6I8	188 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700	CMTM4	Q8IZR5	234 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700	FAM185A	Q8N0U4	392 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700	C11orf42	Q8N5U0	333 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700		Q8N7P7	452 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700	C3orf56	Q8N813	242 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700	OR5D13	Q8NGL4	314 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700	PECR	Q9BY49	303 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700	SLIRP	Q9GZT3	109 aa	Known RBP	13.71	□□□□□ -0.21
UBC-208	ENST00000540700	COMMD3	Q9UBI1	195 aa		13.71	□□□□□ -0.21
UBC-208	ENST00000540700	ELF5	Q9UKW6	265 aa	Predicted RBP	13.71	□□□□□ -0.21
UBC-208	ENST00000540700	TRBV23-1	A0A0A0MS06	115 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	ZNF701	M0R085	212 aa	Predicted RBP	13.7	□□□□□ -0.22
UBC-208	ENST00000540700	ENSA	O43768	121 aa	Known RBP	13.7	□□□□□ -0.22
UBC-208	ENST00000540700	TMEM127	O75204	238 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	EIF4E	P06730	217 aa	Known RBP	13.7	□□□□□ -0.22
UBC-208	ENST00000540700	MMP9	P14780	707 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	PAX5	Q02548	391 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	DCAF12L2	Q5VW00	463 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	CD276	Q5ZPR3	534 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	ZNF497	Q6ZNH5	498 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	GAPT	Q8N292	157 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	DTX3	Q8N9I9	347 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	OR13A1	Q8NGR1	328 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	OR10R2	Q8NGX6	335 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	SGMS2	Q8NHU3	365 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	PPP1R35	Q8TAP8	253 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	KCTD12	Q96CX2	325 aa	Known RBP	13.7	□□□□□ -0.22
UBC-208	ENST00000540700	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.7	□□□□□ -0.22
UBC-208	ENST00000540700	DCUN1D5	Q9BTE7	237 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	ATG5	Q9H1Y0	275 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	MIXL1	Q9H2W2	232 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	ZMAT3	Q9HA38	289 aa	Known RBP	13.7	□□□□□ -0.22
UBC-208	ENST00000540700	SPACA1	Q9HBV2	294 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	CCDC59	Q9P031	241 aa	Known RBP	13.7	□□□□□ -0.22
UBC-208	ENST00000540700	KIF25	Q9UIL4	384 aa		13.7	□□□□□ -0.22
UBC-208	ENST00000540700	ODAM	A1E959	279 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	MCRIP1	C9JLW8	97 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	MFNG	O00587	321 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	HPGDS	O60760	199 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	GNB3	P16520	340 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	KCNJ3	P48549	501 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	ARF6	P62330	175 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	C11orf91	Q3C1V1	193 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	SAMD12	Q8N8I0	201 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	OR56B1	Q8NGI3	324 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	MRPL30	Q8TCC3	161 aa	Known RBP	13.69	□□□□□ -0.22
UBC-208	ENST00000540700	NEDD4L	Q96PU5	975 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	SIRPD	Q9H106	197 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	ETAA1	Q9NY74	926 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700	AK3	Q9UIJ7	227 aa		13.69	□□□□□ -0.22
UBC-208	ENST00000540700		A0A0G2JMP0	313 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700		A0A0X1KG70	313 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700		A0A1W2PQ09	198 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	MMP23A	O75900	390 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	MT-ND4	P03905	459 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	GLA	P06280	429 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	LIPF	P07098	398 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	CGB3	P0DN86	165 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	CGB7	P0DN87	165 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	GDNF	P39905	211 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	RANBP1	P43487	201 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	SLC35E4	Q6ICL7	350 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.68	□□□□□ -0.22
UBC-208	ENST00000540700	BAIAP2L2	Q6UXY1	529 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700		Q6ZTK2	550 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	IZUMO1	Q8IYV9	350 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	OR4M2	Q8NGB6	313 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	NEK7	Q8TDX7	302 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	FAHD2A	Q96GK7	314 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	TBX15	Q96SF7	602 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	NXF2	Q9GZY0	626 aa	Known RBP	13.68	□□□□□ -0.22
UBC-208	ENST00000540700	ABCG5	Q9H222	651 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	ONECUT1	Q9UBC0	465 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	HSF4	Q9ULV5	492 aa		13.68	□□□□□ -0.22
UBC-208	ENST00000540700	MEIKIN	A0A087WXM9	373 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	CTDSP2	O14595	271 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	PTHLH	P12272	177 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	HIST1H1D	P16402	221 aa	Known RBP	13.67	□□□□□ -0.22
UBC-208	ENST00000540700	ELK1	P19419	428 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	CDK2	P24941	298 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	MEF2C	Q06413	473 aa	Predicted RBP	13.67	□□□□□ -0.22
UBC-208	ENST00000540700	DYNC1I2	Q13409	638 aa	Known RBP	13.67	□□□□□ -0.22
UBC-208	ENST00000540700	C17orf58	Q2M2W7	97 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	UBE2NL	Q5JXB2	153 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	UTF1	Q5T230	341 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	BTNL3	Q6UXE8	466 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	OR4K15	Q8NH41	348 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	MRGPRD	Q8TDS7	321 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	CCDC107	Q8WV48	283 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	ACOT12	Q8WYK0	555 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	CORO2A	Q92828	525 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	GCDH	Q92947	438 aa	Predicted RBP	13.67	□□□□□ -0.22
UBC-208	ENST00000540700	DGCR14	Q96DF8	476 aa	Known RBP	13.67	□□□□□ -0.22
UBC-208	ENST00000540700	RAB3C	Q96E17	227 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	C7orf69	Q9H7B7	122 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	PLEKHJ1	Q9NW61	149 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700	LINC00312	Q9Y6C7	94 aa		13.67	□□□□□ -0.22
UBC-208	ENST00000540700		A0A075B6Q4	140 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms