RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 CFHR3Q02985 330 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 PDZK1IP1Q13113 114 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 Q6P435 159 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 FAHD1Q6P587 224 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 CATSPERDQ86XM0 798 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 SLC35F2Q8IXU6 374 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 Q8N6K4 173 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 Q8N9W7 124 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 PP6455Q8WZ26 134 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 RDH12Q96NR8 316 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 Q9H521 79 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 LINC00574Q9H8X3 128 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 ZNF556Q9HAH1 456 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 SMPD3Q9NY59 655 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 ORC6Q9Y5N6 252 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
CLSTN3-209ENST00000539982 IGKV1-9A0A0C4DH69 117 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 IGKV1-12A0A0C4DH73 117 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 SLC33A1O00400 549 aaPredicted RBP9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 LDLRAD4O15165 306 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 IGKV1D-12P01611 117 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 GAPDHP04406 335 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 ANXA8P13928 327 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 GP9P14770 177 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 SPNP16150 400 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 VDAC1P21796 283 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 PRKACBP22694 351 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 C21orf33P30042 268 aaPredicted RBP9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 DAPP51397 102 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 RUNX1Q01196 453 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 ATXN7L3Q14CW9 347 aaPredicted RBP9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 KDM4DQ6B0I6 523 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 SLC16A12Q6ZSM3 486 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 MOB3BQ86TA1 216 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 YIPF7Q8N8F6 280 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 OR2T10Q8NGZ9 312 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 MYOZ3Q8TDC0 251 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 RASL11BQ9BPW5 248 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 PPIL3Q9H2H8 161 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 NCOR1P1Q9H4R4 102 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 RHOFQ9HBH0 211 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 ADGRL4Q9HBW9 690 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 PLSCR3Q9NRY6 295 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 CLN6Q9NWW5 311 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 CALYQ9NYX4 217 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 IDI2-AS1Q9NZ38 188 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 RAB26Q9ULW5 256 aa9.04□□□□□ -0.96
CLSTN3-209ENST00000539982 IGHV1-3A0A0C4DH29 117 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 TRIM64CA6NLI5 447 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 NPIPB11E5RHQ5 1161 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 I3L521 148 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 OVOL1O14753 267 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 HSD17B6O14756 317 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 DEGS1O15121 323 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 SAP30O75446 220 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 JTBO76095 146 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 KDM4BO94953 1096 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 KRT8P05787 483 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 ATF1P18846 271 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 GNG10P50151 68 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 ZNF616Q08AN1 781 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 ZNF816Q0VGE8 651 aaPredicted RBP9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 KIAA0141Q14154 515 aaPredicted RBP9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 ASPHD1Q5U4P2 390 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 LHFPL2Q6ZUX7 228 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 IZUMO1Q8IYV9 350 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 DHRSXQ8N5I4 330 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 FAM71E2Q8N5Q1 922 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 ZNF491Q8N8L2 437 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 OR10A7Q8NGE5 316 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 OR10X1Q8NGY0 326 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 DCUN1D4Q92564 292 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 KCTD7Q96MP8 289 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 S1PR3Q99500 378 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 ISYNA1Q9NPH2 558 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 CHCHD3Q9NX63 227 aaKnown RBP9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 H2AFY2Q9P0M6 372 aaPredicted RBP9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 ZNF580Q9UK33 172 aa9.03□□□□□ -0.96
CLSTN3-209ENST00000539982 MEIKINA0A087WXM9 373 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 IGHV3-72A0A0B4J1Y9 119 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 DENRO43583 198 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 PRKYO43930 277 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 IL1AP01583 271 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 IGF1P05019 195 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 OR5H8P0DN80 308 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 HTR1FP30939 366 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 CAPGP40121 348 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 GLP1RP43220 463 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 LTC4SQ16873 150 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 TMEM65Q6PI78 240 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 UTS2BQ765I0 119 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 SSX6Q7RTT6 188 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 BCDIN3DQ7Z5W3 292 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 OR8H1Q8NGG4 311 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 OR51T1Q8NGJ9 327 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 OR13A1Q8NGR1 328 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 RFESDQ8TAC1 157 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 ADAT3Q96EY9 351 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 MBOAT4Q96T53 435 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms