RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 GEMIN2O14893 280 aaKnown RBP12.86□□□□□ -0.35
DDB1-216ENST00000539739 SIGLEC5O15389 551 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 OR2H2O95918 312 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 IGHV2-5P01817 119 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A15PP0C7V4 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A13PP0C7W8 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A14PP0C7W9 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A24PP0C7X0 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 GABRR1P24046 479 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 CEBPDP49716 269 aaPredicted RBP12.86□□□□□ -0.35
DDB1-216ENST00000539739 COL10A1Q03692 680 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 LOXL1Q08397 574 aaPredicted RBP12.86□□□□□ -0.35
DDB1-216ENST00000539739 MZT2AQ6P582 158 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 LYPD2Q6UXB3 125 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 CD177Q8N6Q3 437 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 PPP1R35Q8TAP8 253 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 GAFA1Q96PS6 74 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 TM2D1Q9BX74 207 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 SPACA1Q9HBV2 294 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 KIF25Q9UIL4 384 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 NDUFB3O43676 98 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 WNT2P09544 360 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 AMY2BP19961 511 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 ASAH1Q13510 395 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 PDCD1Q15116 288 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 LRRC10Q5BKY1 277 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 Q6P435 159 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 TEX261Q6UWH6 196 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 ZNF251Q9BRH9 671 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 LPAR5Q9H1C0 372 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 U3KQ87 197 aa12.85□□□□□ -0.35
DDB1-216ENST00000539739 MYO9AB2RTY4 2548 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 A0A075B6Q4 140 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 F5H0A9 414 aaPredicted RBP12.84□□□□□ -0.35
DDB1-216ENST00000539739 SIRPB1O00241 398 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 TFF1P04155 84 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 VAMP1P23763 118 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 LMO1P25800 156 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 PITPNBP48739 271 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 NPY4RP50391 375 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 LMO4P61968 165 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 BAK1Q16611 211 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 CCDC190Q86UF4 302 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 FAM216BQ8N7L0 139 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 ZNRF1Q8ND25 227 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 TMEM185AQ8NFB2 350 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 OR8H1Q8NGG4 311 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 OR56B1Q8NGI3 324 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 OR5D13Q8NGL4 314 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 SNX22Q96L94 193 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 BIN3Q9NQY0 253 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 COMMD3Q9UBI1 195 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 CLN8Q9UBY8 286 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 MAB21L2Q9Y586 359 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 SCGNO76038 276 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 S100A8P05109 93 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 H2AFB1P0C5Y9 115 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 EFNB2P52799 333 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 GNB2P62879 340 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 NEDD4LQ96PU5 975 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 FAM234AQ9H0X4 552 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 ATG5Q9H1Y0 275 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 CTSZQ9UBR2 303 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 SLC25A10Q9UBX3 287 aaPredicted RBP12.84□□□□□ -0.35
DDB1-216ENST00000539739 METRNQ9UJH8 293 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 CBY1Q9Y3M2 126 aa12.84□□□□□ -0.35
DDB1-216ENST00000539739 MAP1AP78559 2803 aaPredicted RBP12.83□□□□□ -0.36
DDB1-216ENST00000539739 A0A096LNT2 108 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 K7N7A8 449 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 SLC33A1O00400 549 aaPredicted RBP12.83□□□□□ -0.36
DDB1-216ENST00000539739 DVL1O14640 695 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 GPR37O15354 613 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 FABP1P07148 127 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 FUT3P21217 361 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 S100PP25815 95 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 BLVRBP30043 206 aaPredicted RBP12.83□□□□□ -0.36
DDB1-216ENST00000539739 NUP62P37198 522 aaPredicted RBP12.83□□□□□ -0.36
DDB1-216ENST00000539739 VEGFCP49767 419 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 RAB4BP61018 213 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 PLA2G7Q13093 441 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 PAN3Q58A45 887 aaKnown RBP12.83□□□□□ -0.36
DDB1-216ENST00000539739 FAM89BQ8N5H3 189 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 EIF4E3Q8N5X7 224 aaKnown RBP12.83□□□□□ -0.36
DDB1-216ENST00000539739 SAMD12Q8N8I0 201 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 CMTM3Q96MX0 182 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 NICN1Q9BSH3 213 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 SSBP3Q9BWW4 388 aaPredicted RBP12.83□□□□□ -0.36
DDB1-216ENST00000539739 VPS13CQ709C8 3753 aa12.83□□□□□ -0.36
DDB1-216ENST00000539739 TRAV24A0A0B4J272 114 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 A0A1B0GW55 424 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 MPTX1A8MV57 137 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 MCRIP1C9JLW8 97 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 PSPNO60542 156 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 PDCD6O75340 191 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 ZNF737O75373 536 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 TK1P04183 234 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 DUX4L2P0CJ85 424 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 DUX4L3P0CJ86 424 aa12.82□□□□□ -0.36
DDB1-216ENST00000539739 DUX4L4P0CJ87 422 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms