RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 FAM90A23PA8MXZ1 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 RBBP9O75884 186 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 HEXAP06865 529 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 GSTP1P09211 210 aaKnown RBP10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A15PP0C7V4 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A13PP0C7W8 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A14PP0C7W9 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 FAM90A24PP0C7X0 464 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 BLVRBP30043 206 aaPredicted RBP10.71□□□□□ -0.69
CCDC42-202ENST00000539522 NPY4RP50391 375 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 DLX1P56177 255 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 TMEM50BP56557 158 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 SSBP1Q04837 148 aaKnown RBP10.71□□□□□ -0.69
CCDC42-202ENST00000539522 PAX8Q06710 450 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 PNLIPRP3Q17RR3 467 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 RGS21Q2M5E4 152 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 MOGAT2Q3SYC2 334 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 ZNF260Q3ZCT1 412 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 CLEC9AQ6UXN8 241 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 Q6ZTK2 550 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 NLRC3Q7RTR2 1065 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 SLC36A1Q7Z2H8 476 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 LINC00596Q86U02 117 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 TPRX1Q8N7U7 411 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 TMEM185AQ8NFB2 350 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 PLPPR1Q8TBJ4 325 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 SMIM4Q8WVI0 70 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 MED30Q96HR3 178 aa10.71□□□□□ -0.69
CCDC42-202ENST00000539522 RPUSD1Q9UJJ7 312 aaKnown RBP10.71□□□□□ -0.69
CCDC42-202ENST00000539522 PPIAL4CA0A0B4J2A2 164 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 KIR2DS1A0A191URI9 304 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 A0A1W2PQ09 198 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 MEX3AA1L020 520 aaKnown RBP10.7□□□□□ -0.7
CCDC42-202ENST00000539522 NKX6-3A6NJ46 265 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 SOCS1O15524 211 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 NDUFB3O43676 98 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 ORC5O43913 435 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 FOXH1O75593 365 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 ECDO95905 644 aaPredicted RBP10.7□□□□□ -0.7
CCDC42-202ENST00000539522 MMP9P14780 707 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 DLX6P56179 175 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 ERVFRD-1P60508 538 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 DGCR2P98153 550 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 ZNF273Q14593 569 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 LURAP1LQ8IV03 231 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 BPIFB2Q8N4F0 458 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 Q8N7P7 452 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 POC5Q8NA72 575 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 SUMF2Q8NBJ7 301 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 OR52I2Q8NH67 350 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 SNX22Q96L94 193 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 FAM234AQ9H0X4 552 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 PPA2Q9H2U2 334 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.7□□□□□ -0.7
CCDC42-202ENST00000539522 GLS2Q9UI32 602 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 HSF4Q9ULV5 492 aa10.7□□□□□ -0.7
CCDC42-202ENST00000539522 MTORP42345 2549 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 LOC105371242A0A075B767 164 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 TRAV20A0A0B4J274 112 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 HSPB6O14558 160 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 SH2D1BO14796 132 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 DEGS1O15121 323 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 CA11O75493 328 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 FSHBP01225 129 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 CD3GP09693 182 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 ZNF44P15621 663 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 HIST1H1DP16402 221 aaKnown RBP10.69□□□□□ -0.7
CCDC42-202ENST00000539522 NDUFB7P17568 137 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 AP3S2P59780 193 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 ASAH1Q13510 395 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 MPV17LQ2QL34 196 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 ZNF57Q68EA5 555 aaPredicted RBP10.69□□□□□ -0.7
CCDC42-202ENST00000539522 TMEM200BQ69YZ2 307 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 MZT2BQ6NZ67 158 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 IL17RELQ6ZVW7 336 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 TOMM5Q8N4H5 51 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 ASCC1Q8N9N2 400 aaKnown RBP10.69□□□□□ -0.7
CCDC42-202ENST00000539522 MINDY2Q8NBR6 621 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 GPX8Q8TED1 209 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 DYRK2Q92630 601 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 NEDD4LQ96PU5 975 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 SIRPDQ9H106 197 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 PLEKHJ1Q9NW61 149 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 TAS2R8Q9NYW2 309 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 MTFP1Q9UDX5 166 aa10.69□□□□□ -0.7
CCDC42-202ENST00000539522 RBMX2Q9Y388 322 aaKnown RBP10.69□□□□□ -0.7
CCDC42-202ENST00000539522 SONP18583 2426 aaKnown RBP10.69□□□□□ -0.7
CCDC42-202ENST00000539522 NIPBLQ6KC79 2804 aaeCLIP10.68□□□□□ -0.7
CCDC42-202ENST00000539522 WNK2Q9Y3S1 2297 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 MEIOCA2RUB1 952 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 CENPXA8MT69 81 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 SERPINE3A8MV23 424 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 INAFM1C9JVW0 142 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 PLA2G10O15496 165 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 LANCL1O43813 399 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 OR7C1O76099 320 aaPredicted RBP10.68□□□□□ -0.7
CCDC42-202ENST00000539522 CSN2P05814 226 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 LPLP06858 475 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 CGB3P0DN86 165 aa10.68□□□□□ -0.7
CCDC42-202ENST00000539522 CGB7P0DN87 165 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms