RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 SND1-IT1Q9HBX3 110 aa1.96□□□□□ -2.1
SNHG1-210ENST00000539303 ENOPH1Q9UHY7 261 aa1.96□□□□□ -2.1
SNHG1-210ENST00000539303 TBX21Q9UL17 535 aa1.96□□□□□ -2.1
SNHG1-210ENST00000539303 POMPQ9Y244 141 aa1.96□□□□□ -2.1
SNHG1-210ENST00000539303 ALG5Q9Y673 324 aa1.96□□□□□ -2.1
SNHG1-210ENST00000539303 TMEM14AQ9Y6G1 99 aa1.96□□□□□ -2.1
SNHG1-210ENST00000539303 C9orf84Q5VXU9 1444 aa1.96□□□□□ -2.1
SNHG1-210ENST00000539303 RIMS2Q9UQ26 1411 aa1.96□□□□□ -2.1
SNHG1-210ENST00000539303 CHD2O14647 1828 aaKnown RBP1.96□□□□□ -2.1
SNHG1-210ENST00000539303 EVC2Q86UK5 1308 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 IGHV2-26A0A0B4J1V2 119 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 SULT1B1O43704 296 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 KCNK2O95069 426 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 HLA-DQB1P01920 261 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 CTXN2P0C2S0 81 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 C1GALT1C1LP0DN25 315 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 AZU1P20160 251 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 ELK4P28324 431 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 IMPA1P29218 277 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 RPL12P30050 165 aaKnown RBP1.95□□□□□ -2.1
SNHG1-210ENST00000539303 SLC6A1P30531 599 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 HSPA13P48723 471 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 MNAT1P51948 309 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 CMC4P56277 68 aaPredicted RBP1.95□□□□□ -2.1
SNHG1-210ENST00000539303 MP68P56378 58 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 C1QTNF8P60827 252 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 RAB2AP61019 212 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 ATP5G2Q06055 141 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 SKP2Q13309 424 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 PTGES3Q15185 160 aaKnown RBP1.95□□□□□ -2.1
SNHG1-210ENST00000539303 UBE2SQ16763 222 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 LRRC26Q2I0M4 334 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 GLYATQ6IB77 296 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 ZFP1Q6P2D0 407 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 SHISA6Q6ZSJ9 500 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 RASSF6Q6ZTQ3 369 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 CLEC20AQ6ZU45 233 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 LINC01551Q86U37 167 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 ORMDL3Q8N138 153 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 STK40Q8N2I9 435 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 SLC25A45Q8N413 288 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 CYB561D1Q8N8Q1 229 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 Q8N9L7 120 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 CIRBP-AS1Q8TBR5 109 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 HAVCR2Q8TDQ0 301 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 TAMM41Q96BW9 452 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 OTUB2Q96DC9 234 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 PPP1R36Q96LQ0 422 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 DERL3Q96Q80 235 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 CHCHD7Q9BUK0 85 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 TSGA10Q9BZW7 698 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 OR51B6Q9H340 312 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 VSIRQ9H7M9 311 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 LHX9Q9NQ69 397 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 SLC2A9Q9NRM0 540 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 ZNF355PQ9NSJ1 428 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 C21orf62Q9NYP8 219 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 TAC3Q9UHF0 121 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 GLS2Q9UI32 602 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 C14orf166Q9Y224 244 aaKnown RBP1.95□□□□□ -2.1
SNHG1-210ENST00000539303 SLC22A13Q9Y226 551 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 MYO10Q9HD67 2058 aa1.95□□□□□ -2.1
SNHG1-210ENST00000539303 BAZ2AQ9UIF9 1905 aaKnown RBP1.95□□□□□ -2.1
SNHG1-210ENST00000539303 DOCK9Q9BZ29 2069 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 IGKV1-6A0A0C4DH72 117 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 CENPVL3A0A0U1RRI6 287 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 A0A1W2PQL4 384 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-210ENST00000539303 A8MWL6 223 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 MFNGO00587 321 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 RBFOX2O43251 390 aaKnown RBP eCLIP1.94□□□□□ -2.1
SNHG1-210ENST00000539303 CXorf1O96002 111 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 IGKV1-39P01597 117 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 IGKV1D-39P04432 117 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 IFNA16P05015 189 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 ADRA2AP08913 450 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 LINC00614P0C842 121 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 GABRA1P14867 456 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 IL1RNP18510 177 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 HSD11B1P28845 292 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 CXCL12P48061 93 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 FMODQ06828 376 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 PAFAH1B3Q15102 231 aaKnown RBP1.94□□□□□ -2.1
SNHG1-210ENST00000539303 TMEM176BQ3YBM2 270 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-210ENST00000539303 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 CLVS2Q5SYC1 327 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 C1orf195Q5TG92 126 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 FAM222AQ5U5X8 452 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 SPATA31B1PQ5VZV4 182 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 FAM19A3Q7Z5A8 133 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 WDR86Q86TI4 376 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 ZIC4Q8N9L1 334 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 ZNF555Q8NEP9 628 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 LINC01560Q8TB33 94 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 C2orf15Q8WU43 125 aaKnown RBP1.94□□□□□ -2.1
SNHG1-210ENST00000539303 TLCD1Q96CP7 247 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 DGCR14Q96DF8 476 aaKnown RBP1.94□□□□□ -2.1
SNHG1-210ENST00000539303 CYYR1Q96J86 154 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 OLFM3Q96PB7 478 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 BCL2L14Q9BZR8 327 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 PARVAQ9NVD7 372 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms