RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ATP6V1G3Q96LB4 118 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 SERPINB11Q96P15 392 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 OR8B2Q96RD0 313 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 LINC01587Q99440 93 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 BBS2Q9BXC9 721 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 TSGA10Q9BZW7 698 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 SLC25A31Q9H0C2 315 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 MFSD1Q9H3U5 465 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 METTL17Q9H7H0 456 aaPredicted RBP1.26□□□□□ -2.21
CCDC7-209ENST00000539197 MS4A12Q9NXJ0 267 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 TAS2R13Q9NYV9 303 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 SLC22A14Q9Y267 594 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 NUP205Q92621 2012 aa1.26□□□□□ -2.21
CCDC7-209ENST00000539197 A0A1B0GU33 70 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 IQCF5A8MTL0 148 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 F5H5P2 479 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 RNASEK-C17orf49H0YIS7 233 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 SMLR1H3BR10 107 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 K7EPK0 472 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 M0QXV9 152 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 SULT1C2O00338 296 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 UPK2O00526 184 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 TNFAIP8O95379 198 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 FADS2O95864 444 aaKnown RBP1.25□□□□□ -2.21
CCDC7-209ENST00000539197 IGKV1D-33P01593 117 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 IGKV1-33P01594 117 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 CECR9P0C854 216 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 RD3LP0DJH9 198 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 GTF2H1P32780 548 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 RAB25P57735 213 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 CD164Q04900 197 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 PRDX1Q06830 199 aaKnown RBP1.25□□□□□ -2.21
CCDC7-209ENST00000539197 BAXQ07812 192 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 BNIP2Q12982 314 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 USF2Q15853 346 aaPredicted RBP1.25□□□□□ -2.21
CCDC7-209ENST00000539197 ZBTB6Q15916 424 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 LRRC6Q86X45 466 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 C10orf107Q8IVU9 208 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 ZFP82Q8N141 532 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 ZNF567Q8N184 647 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 GATD1Q8NB37 220 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 TWIST2Q8WVJ9 160 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 PGLYRP3Q96LB9 341 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 YPEL4Q96NS1 127 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 ANAPC13Q9BS18 74 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 TAPBPLQ9BX59 468 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 SUCNR1Q9BXA5 334 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 FBXL15Q9H469 300 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 SPACA1Q9HBV2 294 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 DIABLOQ9NR28 239 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 FADS3Q9Y5Q0 445 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 USH1CQ9Y6N9 552 aa1.25□□□□□ -2.21
CCDC7-209ENST00000539197 ABCB11O95342 1321 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 NRCAMQ92823 1304 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 TRAV8-3A0A0A6YYJ7 113 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 IGHV3-43A0A0B4J1X8 118 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 A0A1B0GX12 115 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 POLR3GO15318 223 aaPredicted RBP1.24□□□□□ -2.21
CCDC7-209ENST00000539197 PDCD6O75340 191 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 SOD3P08294 240 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 PRTN3P24158 256 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 S100A2P29034 98 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 RPA3P35244 121 aaPredicted RBP1.24□□□□□ -2.21
CCDC7-209ENST00000539197 SPAM1P38567 509 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 PLTPP55058 493 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 HBG1P69891 147 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 HBG2P69892 147 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 DMTNQ08495 405 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 PMS2P3Q13401 168 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 RAB31Q13636 194 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 FLOT2Q14254 428 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 OR4D1Q15615 310 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 ELP2Q6IA86 826 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 GLYATQ6IB77 296 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 DGAT2L6Q6ZPD8 337 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 DPPA2Q7Z7J5 298 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 MSRB3Q8IXL7 192 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 C17orf78Q8N4C9 275 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 Q8NAQ8 132 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 RNASEH2CQ8TDP1 164 aaKnown RBP1.24□□□□□ -2.21
CCDC7-209ENST00000539197 PDCD6IPQ8WUM4 868 aaKnown RBP1.24□□□□□ -2.21
CCDC7-209ENST00000539197 GTF2H4Q92759 462 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 CCDC127Q96BQ5 260 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 MRAP2Q96G30 205 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 PITX2Q99697 317 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 APOL4Q9BPW4 351 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 MED10Q9BTT4 135 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 ULBP1Q9BZM6 244 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 OR52A5Q9H2C5 316 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 ZNF286AQ9HBT8 521 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 SCML1Q9UN30 329 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 URGCP-MRPS24S4R325 110 aa1.24□□□□□ -2.21
CCDC7-209ENST00000539197 SETD1AO15047 1707 aaKnown RBP1.23□□□□□ -2.21
CCDC7-209ENST00000539197 A0A1W2PRG6 482 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 ERICH2A1L162 156 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 GOLGA8IPA6NC78 632 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 PGPA6NDG6 321 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 A6NED7 52 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 TRPC5OSA6NMA1 111 aa1.23□□□□□ -2.21
CCDC7-209ENST00000539197 CD300LBA8K4G0 201 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms