RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 IGHV3-64DA0A0J9YX35 117 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 RNASEK-C17orf49H0YIS7 233 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 F2RL1P55085 397 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 SRPXP78539 464 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 SELENOHQ8IZQ5 122 aaKnown RBP21.22■□□□□ 0.99
RAB40C-204ENST00000538492 SEC11CQ9BY50 192 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 BORCS7-ASMTA0A0B4J1R7 106 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 TUSC2O75896 110 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 CD80P33681 288 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 SRSF6Q13247 344 aaKnown RBP21.22■□□□□ 0.99
RAB40C-204ENST00000538492 TMEM178AQ8NBL3 297 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 TMEM56Q96MV1 263 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 SH3BGRL3Q9H299 93 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 OR51I2Q9H344 312 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 SPACA1Q9HBV2 294 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 TMEM56-RWDD3S4R434 201 aa21.22■□□□□ 0.99
RAB40C-204ENST00000538492 ZNF44P15621 663 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 NPBWR1P48145 328 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 FHITP49789 147 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 POLR2GP62487 172 aaKnown RBP eCLIP21.21■□□□□ 0.99
RAB40C-204ENST00000538492 IL24Q13007 206 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 P4HA3Q7Z4N8 544 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 HSD17B11Q8NBQ5 300 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 MAGT1Q9H0U3 335 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 ZDHHC11Q9H8X9 412 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 FAM212BQ9NTI7 297 aaPredicted RBP21.21■□□□□ 0.99
RAB40C-204ENST00000538492 PURGQ9UJV8 347 aaKnown RBP21.21■□□□□ 0.99
RAB40C-204ENST00000538492 ADAM20O43506 726 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 CDS2O95674 445 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 PCSK4Q6UW60 755 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 LILRB1Q8NHL6 650 aaPredicted RBP21.21■□□□□ 0.99
RAB40C-204ENST00000538492 ARV1Q9H2C2 271 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 GP6Q9HCN6 339 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 CACNA1HO95180 2353 aa21.21■□□□□ 0.99
RAB40C-204ENST00000538492 C9JQL5 133 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 NXPH3O95157 252 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 SFTA3P0C7M3 94 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 NKX2-1P43699 371 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-204ENST00000538492 ERVS71-1P61550 626 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 RND3P61587 244 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 TBC1D28Q2M2D7 210 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 DLL3Q9NYJ7 618 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 DSPP15924 2871 aaKnown RBP21.2■□□□□ 0.98
RAB40C-204ENST00000538492 TRAV39A0A0B4J263 110 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 FAM24AA6NFZ4 105 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 SLC33A1O00400 549 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-204ENST00000538492 C1QL1O75973 258 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 IDH3GP51553 393 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-204ENST00000538492 ZNF616Q08AN1 781 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 IL1F10Q8WWZ1 152 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 OR2J1Q9GZK6 312 aa21.2■□□□□ 0.98
RAB40C-204ENST00000538492 NKX2-8O15522 239 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 LYZL6O75951 148 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 TNFSF10P50591 281 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 EWSR1Q01844 656 aaKnown RBP eCLIP21.19■□□□□ 0.988e-7■■■■□ 22.8
RAB40C-204ENST00000538492 CXorf66Q5JRM2 361 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-204ENST00000538492 LINC00596Q86U02 117 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 BOD1Q96IK1 185 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 SSSCA1O60232 199 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 WISP2O76076 250 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 CTXN2P0C2S0 81 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 WDR86Q86TI4 376 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 CMTM1Q8IZ96 169 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 GINS3Q9BRX5 216 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 RIMS4Q9H426 269 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-204ENST00000538492 TTC28Q96AY4 2481 aa21.19■□□□□ 0.98
RAB40C-204ENST00000538492 MED19A0JLT2 244 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-204ENST00000538492 DEGS1O15121 323 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 ZNF14P17017 642 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-204ENST00000538492 OMGP23515 440 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 CCL11P51671 97 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 SPAG16Q8N0X2 631 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 OR2C3Q8N628 320 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 KIRREL1Q96J84 757 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 SNAPINO95295 136 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 SEC11BP0C7V7 166 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 SPP1P10451 314 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 CLINT1Q14677 625 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 MIDNQ504T8 468 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 PRR18Q8N4B5 295 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 OR10J5Q8NHC4 309 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 GMPPAQ96IJ6 420 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-204ENST00000538492 PKIBQ9C010 78 aa21.18■□□□□ 0.98
RAB40C-204ENST00000538492 J3QT63 122 aa21.17■□□□□ 0.98
RAB40C-204ENST00000538492 CD5P06127 495 aa21.17■□□□□ 0.98
RAB40C-204ENST00000538492 IGHV1-2P23083 117 aa21.17■□□□□ 0.98
RAB40C-204ENST00000538492 SOX8P57073 446 aa21.17■□□□□ 0.98
RAB40C-204ENST00000538492 ALKBH6Q3KRA9 238 aa21.17■□□□□ 0.98
RAB40C-204ENST00000538492 EP300Q09472 2414 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-204ENST00000538492 SMPD2O60906 423 aa21.17■□□□□ 0.98
RAB40C-204ENST00000538492 PGLYRP1O75594 196 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-204ENST00000538492 TSPAN15O95858 294 aa21.17■□□□□ 0.98
RAB40C-204ENST00000538492 DANCRP0C864 163 aa21.17■□□□□ 0.98
RAB40C-204ENST00000538492 GTF3AQ92664 365 aaKnown RBP21.17■□□□□ 0.98
RAB40C-204ENST00000538492 ERRFI1Q9UJM3 462 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-204ENST00000538492 SIRPB1O00241 398 aa21.16■□□□□ 0.98
RAB40C-204ENST00000538492 UCP1P25874 307 aa21.16■□□□□ 0.98
RAB40C-204ENST00000538492 UBE2NP61088 152 aaKnown RBP21.16■□□□□ 0.98
RAB40C-204ENST00000538492 PPP1CBP62140 327 aa21.16■□□□□ 0.98
RAB40C-204ENST00000538492 FAM76BQ5HYJ3 339 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms