RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 CEACAM18A8MTB9 384 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 GEMIN2O14893 280 aaKnown RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 MED6O75586 246 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 CHATP28329 748 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 F2RL1P55085 397 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 CASP6P55212 293 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 CYCSP99999 105 aaKnown RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 MALLQ13021 153 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 ARL6IP1Q15041 203 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 PEA15Q15121 130 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 AADACL3Q5VUY0 350 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 ASCL5Q7RTU5 278 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 SLC16A13Q7RTY0 426 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 MRPL21Q7Z2W9 205 aaKnown RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 MYPOPQ86VE0 399 aaPredicted RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 LHFPL1Q86WI0 220 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 FBXL14Q8N1E6 418 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 OSR2Q8N2R0 312 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 ARRDC1Q8N5I2 433 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 C9orf106Q8NAJ2 232 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 OR5H2Q8NGV7 314 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 NANPQ8TBE9 248 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 SMIM8Q96KF7 97 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 AQP10Q96PS8 301 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 PAPOLGQ9BWT3 736 aaKnown RBP9.2□□□□□ -0.94
CLIP1-210ENST00000538120 AK3Q9UIJ7 227 aa9.2□□□□□ -0.94
CLIP1-210ENST00000538120 TNRC6AQ8NDV7 1962 aaKnown RBP9.19□□□□□ -0.94
CLIP1-210ENST00000538120 APLNRP35414 380 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 KIR2DL2P43627 348 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-210ENST00000538120 NPBWR2P48146 333 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 TAS2R31P59538 309 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 DHRS11Q6UWP2 260 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 FAM214BQ7L5A3 538 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 CSNK2A3Q8NEV1 391 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 CLCC1Q96S66 551 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 SULT4A1Q9BR01 284 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 SPACA1Q9HBV2 294 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 RAB18Q9NP72 206 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 OSGIN2Q9Y236 505 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 HSBP1L1C9JCN9 74 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 HEXAP06865 529 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 CELA3BP08861 270 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 LYL1P12980 280 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 ZNF14P17017 642 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-210ENST00000538120 RTL6Q6ICC9 239 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 IGFL3Q6UXB1 125 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 CLEC9AQ6UXN8 241 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 SLC25A26Q70HW3 274 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 PEG10Q86TG7 708 aaKnown RBP9.19□□□□□ -0.94
CLIP1-210ENST00000538120 ZNF611Q8N823 705 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 OR10AD1Q8NGE0 317 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 AKR1E2Q96JD6 320 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 TAF9BQ9HBM6 251 aa9.19□□□□□ -0.94
CLIP1-210ENST00000538120 CFAP47Q6ZTR5 3102 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 A0A1W2PR80 420 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 CD300LBA8K4G0 201 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 NDUFS8O00217 210 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 KNG1P01042 644 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 FCGR3AP08637 254 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 OR8U9P0C7N5 309 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 PDCD1Q15116 288 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 TSC22D1Q15714 1073 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 CEACAM21Q3KPI0 293 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 SLC25A24Q6NUK1 477 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 BATF2Q8N1L9 274 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 ZADH2Q8N4Q0 377 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 POC1AQ8NBT0 407 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 OR8U1Q8NH10 309 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 DYRK2Q92630 601 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 C14orf79Q96F83 325 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 SMIM3Q9BZL3 60 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 ST3GAL6Q9Y274 331 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 ATP23Q9Y6H3 246 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 FRYQ5TBA9 3013 aa9.18□□□□□ -0.94
CLIP1-210ENST00000538120 A0A1W2PPE3 182 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 LINC00587B1AMM8 73 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 FAM157AC9JC47 383 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 PF4P02776 101 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 HKR1P10072 659 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 GPM6AP51674 278 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 RBM11P57052 281 aaKnown RBP9.17□□□□□ -0.94
CLIP1-210ENST00000538120 TAS2R46P59540 309 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 IL15RAQ13261 267 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 GABRA6Q16445 453 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 VWA1Q6PCB0 445 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 ZDHHC23Q8IYP9 409 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 SECTM1Q8WVN6 248 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 SARAFQ96BY9 339 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 OR51B6Q9H340 312 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 ZNF701Q9NV72 531 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-210ENST00000538120 DKK4Q9UBT3 224 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 MED12LQ86YW9 2145 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 ZNF732B4DXR9 585 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 K7EM74 188 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 RRP8O43159 456 aaKnown RBP9.17□□□□□ -0.94
CLIP1-210ENST00000538120 LYZL6O75951 148 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 CD5P06127 495 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 FPR2P25090 351 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 PPT1P50897 306 aa9.17□□□□□ -0.94
CLIP1-210ENST00000538120 FOXF2Q12947 444 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms