RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 BPIFA4PQ86YQ2 179 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 FAM219AQ8IW50 185 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 MYOZ3Q8TDC0 251 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 RASL11BQ9BPW5 248 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 R3HDMLQ9H3Y0 253 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 SIRT7Q9NRC8 400 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 MED19A0JLT2 244 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-209ENST00000537178 TMEM218A2RU14 115 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 OOEPA6NGQ2 149 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 PLPP3O14495 311 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 ISLRO14498 428 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 TMIGD3P0DMS9 266 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-209ENST00000537178 HIST1H1EP10412 219 aaKnown RBP9.39□□□□□ -0.91
CLIP1-209ENST00000537178 CTLA4P16410 223 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 FOXO1Q12778 655 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 ANKRD37Q7Z713 158 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 OR4P4Q8NGL7 312 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 C10orf35Q96D05 121 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 TBX21Q9UL17 535 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 STARD10Q9Y365 291 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 DNPH1O43598 174 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 ADAP1O75689 374 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 CRHP06850 196 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 PAFAH1B2P68402 229 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 IZUMO4Q1ZYL8 232 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 DPPA3Q6W0C5 159 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 AMDHD2Q9Y303 409 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 FAM157CP0CG43 387 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 CD226Q15762 336 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 SSX1Q16384 188 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 LAIR2Q6ISS4 152 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 TBC1D26Q86UD7 250 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 OR8B3Q8NGG8 313 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-209ENST00000537178 OR8B2Q96RD0 313 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 CHST1O43916 411 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 CA11O75493 328 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 CXCL10P02778 98 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 MYF5P13349 255 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 CD99P14209 185 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 XAF1Q6GPH4 301 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 MRGPRGQ86SM5 289 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 SPNS2Q8IVW8 549 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 RALYQ9UKM9 306 aaKnown RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 POLR2AP24928 1970 aaKnown RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 IGHV1OR21-1A0A087WYE8 117 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 C2CD4DB7Z1M9 353 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 SIAH2O43255 324 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 PDE6DO43924 150 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 RHBDL1O75783 438 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 LSM6P62312 80 aaKnown RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 PRICKLE4Q2TBC4 344 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 RNF165Q6ZSG1 346 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 SLC16A13Q7RTY0 426 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 PTP4A1Q93096 173 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 K7ERU9 68 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 M0R296 226 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 CDS2O95674 445 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 SMIM6P0DI80 62 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 OR10J1P30954 320 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 KCNMB1Q16558 191 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 GUSBP11Q6P575 273 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 C17orf47Q8NEP4 570 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 SNRNP40Q96DI7 357 aaKnown RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 MYEOVQ96EZ4 313 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 TMUB1Q9BVT8 246 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 ZNF552Q9H707 407 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 TCFL5Q9UL49 500 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 IGLV3-16A0A075B6K0 115 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 CTDSPLO15194 276 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 CTSVO60911 334 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 ARG1P05089 322 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 WNT3P56703 355 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 CD81P60033 236 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 MRPL54Q6P161 138 aaKnown RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 MOGAT1Q96PD6 335 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 ABHD1Q96SE0 405 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 NUDT16L1Q9BRJ7 211 aaKnown RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 SF3B5Q9BWJ5 86 aaKnown RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 SLC6A13Q9NSD5 602 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 CES1P1Q9UKY3 287 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 A0A1B0GTH9 108 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 MPLP40238 635 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 CLEC18BQ6UXF7 455 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 GVQW1Q8N7I0 195 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 ZBTB34Q8NCN2 500 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 OR1L6Q8NGR2 347 aa9.38□□□□□ -0.91
CLIP1-209ENST00000537178 ZNF107Q9UII5 783 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-209ENST00000537178 KCNE1BA0A087WTH5 132 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 ZNF273Q14593 569 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 BHLHA9Q7RTU4 235 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 OR4C12Q96R67 309 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 C7orf77A4D0Y5 90 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 H3BVH4 76 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 TMPRSS2O15393 492 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 MGPP08493 103 aa9.37□□□□□ -0.91
CLIP1-209ENST00000537178 GALNSP34059 522 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms