RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MARS2Q96GW9 593 aaKnown RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 FOXD3Q9UJU5 478 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF732B4DXR9 585 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 K7EP13 123 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 DLL1O00548 723 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 DUX1O43812 170 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF253O75346 499 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 NRASP01111 189 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 HRASP01112 189 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 KRASP01116 189 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 PPBPP02775 128 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 SRP19P09132 144 aaKnown RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 CHRNB4P30926 498 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 TCTN1Q2MV58 587 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 MRGPRGQ86SM5 289 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 NOXO1Q8NFA2 376 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 Q8WTZ3 238 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 MCTS1Q9ULC4 181 aaKnown RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 MRPS18BQ9Y676 258 aaKnown RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 LOC102723971A0A1B0GUV8 181 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 C4orf47A7E2U8 309 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 BMI1P35226 326 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 GPM6AP51674 278 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF816Q0VGE8 651 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 IL24Q13007 206 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 RAB35Q15286 201 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 CYP2G1PQ6ZSU1 146 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 GJC3Q8NFK1 279 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ALG14Q96F25 216 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ZPBPQ9BS86 351 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 HSPB7Q9UBY9 170 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 NLRC5Q86WI3 1866 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 CENPVL1A0A0U1RR11 272 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 K7N7A8 449 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 TNFSF13O75888 250 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 VSIG8P0DPA2 414 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 GALNSP34059 522 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 IER3P46695 156 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 RRADP55042 308 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 SERF2P84101 59 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ZXDAP98168 799 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 SPINK9Q5DT21 86 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 MTURNQ8N3F0 131 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 OBP2BQ9NPH6 170 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ARID1AO14497 2285 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 SERTM2A0A1B0GWG4 89 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 CRYAAP02489 173 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 UMODP07911 640 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 BCL2P10415 239 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 FGF5P12034 268 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 TCN2P20062 427 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 PCBD1P61457 104 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ZIC1Q15915 447 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 Q56UQ5 140 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 VWA1Q6PCB0 445 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 LHFPL2Q6ZUX7 228 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 LSRQ86X29 649 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 AGMATQ9BSE5 352 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 PSMG3Q9BT73 122 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 SNHG12Q9BXW3 62 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ANKRD10Q9NXR5 420 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 IGHV3-64DA0A0J9YX35 117 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 A0A1W2PNR3 127 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 H3BMH7 237 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ACTL6BO94805 426 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 ANKRD55Q3KP44 614 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 PRAMEF5Q5TYX0 476 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 PRAMEF6Q5VXH4 476 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 NUFIP2Q7Z417 695 aaKnown RBP4.74□□□□□ -1.65
PTPRD-213ENST00000537002 OSR2Q8N2R0 312 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 OR13G1Q8NGZ3 307 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 GNG12Q9UBI6 72 aa4.74□□□□□ -1.65
PTPRD-213ENST00000537002 NKX2-6A6NCS4 301 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 GJE1A6NN92 205 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 C11orf94C9JXX5 98 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 METAP1P53582 386 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 RND3P61587 244 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 LINC01590Q5TEZ4 76 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 SYT13Q7L8C5 426 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 FBXL14Q8N1E6 418 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF664Q8N3J9 261 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 CALHM2Q9HA72 323 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 NPIPB13A6NJU9 1138 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 NPIPB4C9JG80 1138 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 M0R135 149 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 PAGE4O60829 102 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 NKX2-2O95096 273 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 TBX6O95947 436 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-213ENST00000537002 AMBPP02760 352 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 P04436 131 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF708P17019 499 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 SELENOTP62341 195 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 MRPS11P82912 194 aaKnown RBP4.73□□□□□ -1.65
PTPRD-213ENST00000537002 DUSP2Q05923 314 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 MRPL54Q6P161 138 aaKnown RBP4.73□□□□□ -1.65
PTPRD-213ENST00000537002 AAED1Q7RTV5 226 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 OR5AS1Q8N127 324 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 UBALD1Q8TB05 177 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 MRPL30Q8TCC3 161 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms