RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 OR5H1A6NKK0 313 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 K7EPK0 472 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 TNFSF13O75888 250 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 CGAP01215 116 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 GAPDHP04406 335 aaKnown RBP11.55□□□□□ -0.56
SMG6-203ENST00000536871 CELA3BP08861 270 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 ZNF44P15621 663 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 GCH1P30793 250 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 TIMP3P35625 211 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 MEOX2P50222 304 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 S100A10P60903 97 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 PSG7Q13046 419 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 SPATA46Q5T0L3 261 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 MBNL2Q5VZF2 373 aaKnown RBP11.55□□□□□ -0.56
SMG6-203ENST00000536871 ZNF585AQ6P3V2 769 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 VWA1Q6PCB0 445 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 BHLHA15Q7RTS1 189 aaPredicted RBP11.55□□□□□ -0.56
SMG6-203ENST00000536871 GAPTQ8N292 157 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 GLYATL2Q8WU03 294 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 RNF141Q8WVD5 230 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 STARD4Q96DR4 205 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 TMEM56Q96MV1 263 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 TMEM222Q9H0R3 208 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 DKK4Q9UBT3 224 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 TMEM56-RWDD3S4R434 201 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 VPS13AQ96RL7 3174 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 PHF1O43189 567 aaPredicted RBP11.55□□□□□ -0.56
SMG6-203ENST00000536871 LILRA1O75019 489 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 NXPH2O95156 264 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 PHLDA2Q53GA4 152 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 IGSF11Q5DX21 431 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 GPR157Q5UAW9 335 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 Q6P435 159 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 Q6ZPA2 131 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 OR10J5Q8NHC4 309 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 MRPL24Q96A35 216 aaKnown RBP11.55□□□□□ -0.56
SMG6-203ENST00000536871 SLC5A7Q9GZV3 580 aa11.55□□□□□ -0.56
SMG6-203ENST00000536871 SAV1Q9H4B6 383 aaPredicted RBP11.55□□□□□ -0.56
SMG6-203ENST00000536871 DNAJC13O75165 2243 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 PTPRBP23467 1997 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 PROB1E7EW31 1015 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 MKRN2OSH3BPM6 223 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 GATCO43716 136 aaKnown RBP11.54□□□□□ -0.56
SMG6-203ENST00000536871 JTBO76095 146 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 GNRHRP30968 328 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 ZNF154Q13106 437 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 BEX5Q5H9J7 111 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 C1orf185Q5T7R7 199 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 UQCC3Q6UW78 93 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 CXorf67Q86X51 503 aaPredicted RBP11.54□□□□□ -0.56
SMG6-203ENST00000536871 AKR1E2Q96JD6 320 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 SFXN3Q9BWM7 321 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 TLNRD1Q9H1K6 362 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 PIGMQ9H3S5 423 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 OR5AC2Q9NZP5 309 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 UBE2J1Q9Y385 318 aaPredicted RBP11.54□□□□□ -0.56
SMG6-203ENST00000536871 OR2W1Q9Y3N9 320 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 MUC3AQ02505 3323 aa11.54□□□□□ -0.56
SMG6-203ENST00000536871 RTTNQ86VV8 2226 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 A0A1B0GWJ7 208 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 ST8SIA3O43173 380 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 KLK10O43240 276 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 SCTP09683 121 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 CECR9P0C854 216 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 RPL12P30050 165 aaKnown RBP11.53□□□□□ -0.56
SMG6-203ENST00000536871 TIMM23BQ5SRD1 257 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 MYPOPQ86VE0 399 aaPredicted RBP11.53□□□□□ -0.56
SMG6-203ENST00000536871 ZNF610Q8N9Z0 462 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 RRNAD1Q96FB5 475 aaKnown RBP11.53□□□□□ -0.56
SMG6-203ENST00000536871 CXorf58Q96LI9 332 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 HES4Q9HCC6 221 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 PRR13Q9NZ81 148 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 FREM1Q5H8C1 2179 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 TEX46H3BTG2 121 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 HS3ST1O14792 307 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 FGF16O43320 207 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 TIMM8AO60220 97 aaPredicted RBP11.53□□□□□ -0.56
SMG6-203ENST00000536871 RHBDL1O75783 438 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 OR2H2O95918 312 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 SMIM6P0DI80 62 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 HKR1P10072 659 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 PVALBP20472 110 aaPredicted RBP11.53□□□□□ -0.56
SMG6-203ENST00000536871 LMO1P25800 156 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 P2RY1P47900 373 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 GNMTQ14749 295 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 ZNF497Q6ZNH5 498 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 SSX8Q7RTT4 187 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 ZNF695Q8IW36 515 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 H1FOOQ8IZA3 346 aaPredicted RBP11.53□□□□□ -0.56
SMG6-203ENST00000536871 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 SECTM1Q8WVN6 248 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 RDH5Q92781 318 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 SEBOXQ9HB31 216 aaPredicted RBP11.53□□□□□ -0.56
SMG6-203ENST00000536871 CYTL1Q9NRR1 136 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 TAAR3PQ9P1P4 343 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 IL36RNQ9UBH0 155 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 WIPI2Q9Y4P8 454 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 WDFY3Q8IZQ1 3526 aa11.53□□□□□ -0.56
SMG6-203ENST00000536871 A0A1W2PR80 420 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms