RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 OR6C3Q9NZP0 311 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 TCF19Q9Y242 345 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 MINOS1-NBL1R4GNA1 71 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 ATP6V1G2O95670 118 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 GTF2F2P13984 249 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 CRHBPP24387 322 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 CD24P25063 80 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 HTR1DP28221 377 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 CD34P28906 385 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 GABRA5P31644 462 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 HABP2Q14520 560 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-206ENST00000536398 FBLN7Q53RD9 439 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 LIPKQ5VXJ0 399 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 AWAT2Q6E213 333 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 FAM53AQ6NSI3 398 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-206ENST00000536398 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 ZNF565Q8N9K5 539 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 TMEM104Q8NE00 496 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 UBALD1Q8TB05 177 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 CCDC107Q8WV48 283 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 KIRREL1Q96J84 757 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 CNBD2Q96M20 576 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 NCOR1P1Q9H4R4 102 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 ABCB10Q9NRK6 738 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 FBLN5Q9UBX5 448 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 TPRKBQ9Y3C4 175 aa11.48□□□□□ -0.57
UBE3B-206ENST00000536398 A0A087X0M5 115 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 A0A1B0GX30 115 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 RGS10O43665 173 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 ZNF780AO75290 641 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-206ENST00000536398 HSMCR30P0CW71 290 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 SSTR5P35346 364 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 KIR2DS4P43632 304 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 KCNJ3P48549 501 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 MPV17LQ2QL34 196 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 Q6ZS46 218 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 CEACAM19Q7Z692 300 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 CDH26Q8IXH8 852 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 MS4A15Q8N5U1 240 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 OR4C13Q8NGP0 309 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 CCDC90BQ9GZT6 254 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 VCX3BQ9H321 246 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 ZNF702PQ9H963 129 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 IDI2-AS1Q9NZ38 188 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 DPM3Q9P2X0 92 aa11.47□□□□□ -0.57
UBE3B-206ENST00000536398 PKD1L1Q8TDX9 2849 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 FAM90A22PA8MWA6 464 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 NPIPB11E5RHQ5 1161 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 LY6LH3BQJ8 138 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 BUB1B-PAK6H3BSN5 160 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 F2RL2O00254 374 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 TOR1AO14656 332 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 CRTAPO75718 401 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-206ENST00000536398 IL1AP01583 271 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 MAPK3P27361 379 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-206ENST00000536398 DYNLT3P51808 116 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 EFNB2P52799 333 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 RPS25P62851 125 aaKnown RBP11.46□□□□□ -0.57
UBE3B-206ENST00000536398 BLCAPP62952 87 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 PAX5Q02548 391 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 GPR176Q14439 515 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 RBM39Q14498 530 aaKnown RBP11.46□□□□□ -0.57
UBE3B-206ENST00000536398 HLA-DRB5Q30154 266 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 TPTE2P1Q5T6R2 138 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 OR10K2Q6IF99 312 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 TMEM91Q6ZNR0 172 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 LINC00596Q86U02 117 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 ZNF596Q8TC21 504 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 FAM46BQ96A09 425 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 SELENOIQ9C0D9 397 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 KCNK15Q9H427 330 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 LINC00574Q9H8X3 128 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 TCF7L1Q9HCS4 588 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 RAB18Q9NP72 206 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 PCDHB16Q9NRJ7 776 aa11.46□□□□□ -0.57
UBE3B-206ENST00000536398 A0A1W2PPE3 182 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 TMEM30CPA0ZSE6 113 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 LEUTXA8MZ59 168 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 SC5DO75845 299 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 MT-ND4P03905 459 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 MGMTP16455 207 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 GNG10P50151 68 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 PRRX1P54821 245 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 GPR50Q13585 617 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 TPBGQ13641 420 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 DIAPH2-AS1Q14236 149 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 RBM48Q5RL73 367 aaKnown RBP11.45□□□□□ -0.58
UBE3B-206ENST00000536398 SIGIRRQ6IA17 410 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 ZNF497Q6ZNH5 498 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 LIAT1Q6ZQX7 453 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 C5orf24Q7Z6I8 188 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 NEK7Q8TDX7 302 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 UFD1Q92890 307 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 UQCC2Q9BRT2 126 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 NPFFR1Q9GZQ6 430 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 RCC2Q9P258 522 aaKnown RBP11.45□□□□□ -0.58
UBE3B-206ENST00000536398 PSG11Q9UQ72 335 aa11.45□□□□□ -0.58
UBE3B-206ENST00000536398 MGAM2Q2M2H8 2515 aa11.44□□□□□ -0.58
UBE3B-206ENST00000536398 C15orf65H3BRN8 121 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms