RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 HOXA4Q00056 320 aaPredicted RBP13.46□□□□□ -0.25
VAMP1-205ENST00000535927 PDCD1Q15116 288 aa13.46□□□□□ -0.25
VAMP1-205ENST00000535927 GDPD1Q8N9F7 314 aa13.46□□□□□ -0.25
VAMP1-205ENST00000535927 DEDD2Q8WXF8 326 aa13.46□□□□□ -0.25
VAMP1-205ENST00000535927 KCNIP1Q9NZI2 227 aa13.46□□□□□ -0.25
VAMP1-205ENST00000535927 METRNQ9UJH8 293 aa13.46□□□□□ -0.25
VAMP1-205ENST00000535927 MRPS7Q9Y2R9 242 aaKnown RBP13.46□□□□□ -0.25
VAMP1-205ENST00000535927 LINC00312Q9Y6C7 94 aa13.46□□□□□ -0.25
VAMP1-205ENST00000535927 YLPM1P49750 1951 aaKnown RBP13.45□□□□□ -0.26
VAMP1-205ENST00000535927 LOC105371242A0A075B767 164 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 TRGV10A0A0A0MS01 117 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 KIR2DS1A0A191URI9 304 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 ODAMA1E959 279 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 UBE2QL1A1L167 161 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 GABARAPH6UMI1 98 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 GSTZ1O43708 216 aaPredicted RBP13.45□□□□□ -0.26
VAMP1-205ENST00000535927 ENSAO43768 121 aaKnown RBP13.45□□□□□ -0.26
VAMP1-205ENST00000535927 ORC5O43913 435 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 LPLP06858 475 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 KIR2DS4P43632 304 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 IL18Q14116 193 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 KIR2DS1Q14954 304 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 ZNF880Q6PDB4 577 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 FAM131AQ6UXB0 335 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 BPIFB2Q8N4F0 458 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 LY6G5BQ8NDX9 201 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 OR10A7Q8NGE5 316 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 FCAMRQ8WWV6 532 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 WDR12Q9GZL7 423 aaKnown RBP13.45□□□□□ -0.26
VAMP1-205ENST00000535927 LINC00574Q9H8X3 128 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 MBNL3Q9NUK0 354 aaKnown RBP13.45□□□□□ -0.26
VAMP1-205ENST00000535927 TAS2R8Q9NYW2 309 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 AK3Q9UIJ7 227 aa13.45□□□□□ -0.26
VAMP1-205ENST00000535927 NIPBLQ6KC79 2804 aaeCLIP13.45□□□□□ -0.26
VAMP1-205ENST00000535927 TRAV20A0A0B4J274 112 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 ZNF729A6NN14 1252 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-205ENST00000535927 EDDM3BP56851 147 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 ACTBP60709 375 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 ACTG1P63261 375 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 AESQ08117 197 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 KIAA2026Q5HYC2 2103 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 SPNS3Q6ZMD2 512 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 BTN2A1Q7KYR7 527 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 KIR3DL3Q8N743 410 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 LINC01356Q8N9X3 169 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 GPX8Q8TED1 209 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 COQ2Q96H96 371 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 GAL3ST2Q9H3Q3 398 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 RPUSD1Q9UJJ7 312 aaKnown RBP13.44□□□□□ -0.26
VAMP1-205ENST00000535927 TRAPPC2LQ9UL33 140 aa13.44□□□□□ -0.26
VAMP1-205ENST00000535927 MEIKINA0A087WXM9 373 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 TMEM235A6NFC5 223 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 RBBP9O75884 186 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 CTXN2P0C2S0 81 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 CD40LGP29965 261 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 ATXN7L3Q14CW9 347 aaPredicted RBP13.43□□□□□ -0.26
VAMP1-205ENST00000535927 BTNL3Q6UXE8 466 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 PLPPR1Q8TBJ4 325 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 MRPL30Q8TCC3 161 aaKnown RBP13.43□□□□□ -0.26
VAMP1-205ENST00000535927 SMIM4Q8WVI0 70 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 ABHD1Q96SE0 405 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 NARFLQ9H6Q4 476 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 CHMP1AQ9HD42 196 aaPredicted RBP13.43□□□□□ -0.26
VAMP1-205ENST00000535927 Q9N2K0 584 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 KIF25Q9UIL4 384 aa13.43□□□□□ -0.26
VAMP1-205ENST00000535927 KIAA1324LA8MWY0 1029 aaPredicted RBP13.42□□□□□ -0.26
VAMP1-205ENST00000535927 RNF223E7ERA6 249 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 M0R1W7 72 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 HSPB6O14558 160 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 GSTT2BP0CG30 244 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 PPIAL4GP0DN37 164 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 NAT1P18440 290 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 RBMXP38159 391 aaKnown RBP13.42□□□□□ -0.26
VAMP1-205ENST00000535927 GLIPR1P48060 266 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 LSAMPQ13449 338 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 ZNF846Q147U1 533 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 BRICD5Q6PL45 260 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 WFDC11Q8NEX6 87 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 H1FXQ92522 213 aaKnown RBP13.42□□□□□ -0.26
VAMP1-205ENST00000535927 ZMAT3Q9HA38 289 aaKnown RBP13.42□□□□□ -0.26
VAMP1-205ENST00000535927 AKIP1Q9NQ31 210 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 ZNF581Q9P0T4 197 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 MTFP1Q9UDX5 166 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 KPTNQ9Y664 436 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 V9GYH0 126 aa13.42□□□□□ -0.26
VAMP1-205ENST00000535927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.42□□□□□ -0.26
VAMP1-205ENST00000535927 A0A0G2JMP0 313 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 A0A0X1KG70 313 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 KBTBD11-OT1A0A1B0GTJ5 212 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 J3QLI3 93 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 SPINT2O43291 252 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 MSMBP08118 114 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 FCGR3AP08637 254 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 ZNF728P0DKX0 622 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 CGB3P0DN86 165 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 CGB7P0DN87 165 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 SELLP14151 372 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 FOSL1P15407 271 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 TBPP20226 339 aa13.41□□□□□ -0.26
VAMP1-205ENST00000535927 RCVRNP35243 200 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms