RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CTF1Q16619 201 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 RSBN1Q5VWQ0 802 aaPredicted RBP9.9□□□□□ -0.82
CHD4-203ENST00000535717 VMO1Q7Z5L0 202 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 CLVS1Q8IUQ0 354 aaPredicted RBP9.9□□□□□ -0.82
CHD4-203ENST00000535717 FAM89BQ8N5H3 189 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 C11orf42Q8N5U0 333 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 TEX29Q8N6K0 151 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 ISOC1Q96CN7 298 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 BARHL1Q9BZE3 327 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 KIF25Q9UIL4 384 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 RAB22AQ9UL26 194 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 LINC00312Q9Y6C7 94 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 TRAV40A0A0B4J280 105 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 A0A1W2PPH5 198 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 FOXI3A8MTJ6 420 aaPredicted RBP9.89□□□□□ -0.83
CHD4-203ENST00000535717 C17orf98A8MV24 154 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 MCRIP1C9JLW8 97 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 SOCS1O15524 211 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 NOL3O60936 208 aaKnown RBP9.89□□□□□ -0.83
CHD4-203ENST00000535717 IL1AP01583 271 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 GLAP06280 429 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 FAM157CP0CG43 387 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 ZNF728P0DKX0 622 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 SNRPBP14678 240 aaKnown RBP9.89□□□□□ -0.83
CHD4-203ENST00000535717 HOXB4P17483 251 aaPredicted RBP9.89□□□□□ -0.83
CHD4-203ENST00000535717 CHATP28329 748 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 BLVRBP30043 206 aaPredicted RBP9.89□□□□□ -0.83
CHD4-203ENST00000535717 ERVFRD-1P60508 538 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 NKAPLQ5M9Q1 402 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 SLC35E4Q6ICL7 350 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 RTN4RL2Q86UN3 420 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 NEK7Q8TDX7 302 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 CORO2AQ92828 525 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 TNFRSF14Q92956 283 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 ZNF714Q96N38 554 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 URM1Q9BTM9 101 aaKnown RBP9.89□□□□□ -0.83
CHD4-203ENST00000535717 NCOR1P1Q9H4R4 102 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 METTL8Q9H825 291 aaKnown RBP9.89□□□□□ -0.83
CHD4-203ENST00000535717 UNKLQ9H9P5 680 aaKnown RBP9.89□□□□□ -0.83
CHD4-203ENST00000535717 SIRT7Q9NRC8 400 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 UBE2J1Q9Y385 318 aaPredicted RBP9.89□□□□□ -0.83
CHD4-203ENST00000535717 KIAA2026Q5HYC2 2103 aa9.89□□□□□ -0.83
CHD4-203ENST00000535717 MEIKINA0A087WXM9 373 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 TRGV10A0A0A0MS01 117 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 CENPVL3A0A0U1RRI6 287 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 UBE2QL1A1L167 161 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 H3BUI4 141 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 PAHP00439 452 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 MT-ND4P03905 459 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 RAB6AP20340 208 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 PRTN3P24158 256 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 SERPINB10P48595 397 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 VEGFCP49767 419 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 RBM39Q14498 530 aaKnown RBP9.88□□□□□ -0.83
CHD4-203ENST00000535717 SPCS2Q15005 226 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 IDNKQ5T6J7 187 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 ZNF497Q6ZNH5 498 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 C6orf201Q7Z4U5 140 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 TRAPPC6BQ86SZ2 158 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 CENPSQ8N2Z9 138 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 OR13A1Q8NGR1 328 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 LGALS14Q8TCE9 139 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 DYRK2Q92630 601 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 LHX4Q969G2 390 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 PTX4Q96A99 478 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 NEDD4LQ96PU5 975 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 BCL7BQ9BQE9 202 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 SULT4A1Q9BR01 284 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 FAAP24Q9BTP7 215 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 OR6C3Q9NZP0 311 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 NUP50Q9UKX7 468 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 CUBNO60494 3623 aa9.88□□□□□ -0.83
CHD4-203ENST00000535717 TRAV39A0A0B4J263 110 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 hCG_1809904A0A1W2PP81 198 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 A0A1W2PPE2 198 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 A0A1W2PR64 198 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 A0A1W2PRV1 198 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 TMEM30CPA0ZSE6 113 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 RNASEK-C17orf49H0YIS7 233 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 RBP4P02753 201 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 GSTT2P0CG29 244 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 GSTT2BP0CG30 244 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 CGB3P0DN86 165 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 CGB7P0DN87 165 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 EPHA1P21709 976 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 TMEM50BP56557 158 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 KLRD1Q13241 179 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 RGS21Q2M5E4 152 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 HCP5Q6MZN7 132 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 ZNF782Q6ZMW2 699 aaPredicted RBP9.87□□□□□ -0.83
CHD4-203ENST00000535717 PDZD9Q8IXQ8 264 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 GAPTQ8N292 157 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 OR56B1Q8NGI3 324 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 OR5H6Q8NGV6 325 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 NDNFQ8TB73 568 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 SLC25A46Q96AG3 418 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 TAS2R3Q9NYW6 316 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 ZNF69Q9UC07 566 aa9.87□□□□□ -0.83
CHD4-203ENST00000535717 SOX21Q9Y651 276 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms