RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ZNF14P17017 642 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 SLC6A1P30531 599 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 CRATP43155 626 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 IDH2P48735 452 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 CCT3P49368 545 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 MNAT1P51948 309 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 SELENOTP62341 195 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 PMS2P3Q13401 168 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 TOMM34Q15785 309 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF141Q15928 474 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 CEACAM16Q2WEN9 425 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 NSUN5P1Q3KNT7 163 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 SLC36A2Q495M3 483 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 XKR7Q5GH72 579 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 AP1ARQ63HQ0 302 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 FAM71E1Q6IPT2 247 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 C3orf62Q6ZUJ4 267 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 SLC22A9Q8IVM8 553 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 LRRC8AQ8IWT6 810 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 CTAGE3PQ8IX95 158 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 C11orf53Q8IXP5 236 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF283Q8N7M2 679 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 Q8N7P7 452 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 EIF1ADQ8N9N8 165 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 FNDC5Q8NAU1 212 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 OR4F6Q8NGB9 312 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 OR51D1Q8NGF3 324 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 OR4D5Q8NGN0 318 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 MFSD8Q8NHS3 518 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 CCDC126Q96EE4 140 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 TPD52L3Q96J77 140 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 SDF2Q99470 211 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 ZBTB18Q99592 522 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 ECSITQ9BQ95 431 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 RHOXF2Q9BQY4 288 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 CHID1Q9BWS9 393 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 CDCA4Q9BXL8 241 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 DPY30Q9C005 99 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 PKIBQ9C010 78 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 VCX2Q9H322 139 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 CACYBPQ9HB71 228 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 TMEM106BQ9NUM4 274 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 UFSP2Q9NUQ7 469 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 DCAF16Q9NXF7 216 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 ANAPC11Q9NYG5 84 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 PITPNC1Q9UKF7 332 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 VPREB3Q9UKI3 123 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 GUCA1BQ9UMX6 200 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 TMED5Q9Y3A6 229 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 NOP16Q9Y3C1 178 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 AK6Q9Y3D8 172 aaKnown RBP2.31□□□□□ -2.04
SNHG1-202ENST00000535689 V9GY05 133 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 LYSTQ99698 3801 aa2.31□□□□□ -2.04
SNHG1-202ENST00000535689 IGHV1-69DA0A0B4J2H0 117 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 CENPVL3A0A0U1RRI6 287 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 A0A1B0GVI7 797 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 C17orf51A8MQB3 221 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 TMEM114B3SHH9 223 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF879B4DU55 563 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 FTCDNL1E5RQL4 147 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 MANBAO00462 879 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 AIM2O14862 343 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 ARPC3O15145 178 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 SUPT7LO94864 414 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 WISP3O95389 354 aaPredicted RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 H6PDO95479 791 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 IGHV1-69P01742 117 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 C2P06681 752 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 GIG44P09565 113 aaPredicted RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 UBTFL6P0CB48 400 aaPredicted RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 TBPP20226 339 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 GSTM3P21266 225 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 GCAP28676 217 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 CD1BP29016 333 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 SRP9P49458 86 aaKnown RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 EFNB2P52799 333 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 KRTAP10-3P60369 221 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 FGF12P61328 243 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 ERVK-25P63136 954 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 TNFAIP6P98066 277 aaPredicted RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 EGFEM1PQ0D2K5 195 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 PDIA2Q13087 525 aaKnown RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 SKP2Q13309 424 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 MAD2L1BPQ15013 274 aaPredicted RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 ZMYND11Q15326 602 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 OR7A5Q15622 319 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF181Q2M3W8 571 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 ALKBH6Q3KRA9 238 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 PDZK1Q5T2W1 519 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 KCNIP4Q6PIL6 250 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 METAP1DQ6UB28 335 aaPredicted RBP2.3□□□□□ -2.04
SNHG1-202ENST00000535689 BRD3OSQ6XYD6 125 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 RNF165Q6ZSG1 346 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 C6orf120Q7Z4R8 191 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 NANOGNBQ7Z5D8 188 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 LRP11Q86VZ4 500 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 ZNF679Q8IYX0 411 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 C11orf42Q8N5U0 333 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 ZIC4Q8N9L1 334 aa2.3□□□□□ -2.04
SNHG1-202ENST00000535689 BHLHE23Q8NDY6 225 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms