RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CST4	P01036	141 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	OR1K1	Q8NGR3	316 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	CABLES2	Q9BTV7	478 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	SOCS1	O15524	211 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	OR8I2	Q8N0Y5	310 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	OR2C3	Q8N628	320 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	NHLRC2	Q8NBF2	726 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	CHRNA10	Q9GZZ6	450 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	RABAC1	Q9UI14	185 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	ANKRD31	Q8N7Z5	1873 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	CTF1	Q16619	201 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	SLC16A12	Q6ZSM3	486 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	CADM3	Q8N126	398 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	C9orf170	A2RU37	121 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	CEACAM21	Q3KPI0	293 aa		13.72	□□□□□ -0.21
NCAPD3-213	ENST00000534532	RPL36A-HNRNPH2	H7BZ11	118 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	CLDN14	O95500	239 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	GFRA1	P56159	465 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	C19orf57	Q0VDD7	668 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	SSX1	Q16384	188 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	OR2W1	Q9Y3N9	320 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	KIAA0141	Q14154	515 aa	Predicted RBP	13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	GVQW1	Q8N7I0	195 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	OR5M8	Q8NGP6	311 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	PLSCR3	Q9NRY6	295 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	PPY	P01298	95 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	ASAH2B	P0C7U1	165 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	TCTE3	Q8IZS6	198 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	OR10Z1	Q8NGY1	313 aa		13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.71	□□□□□ -0.21
NCAPD3-213	ENST00000534532		A0A0U1RQV5	110 aa		13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RAB29	O14966	203 aa		13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SYNGR2	O43760	224 aa		13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ID1	P41134	155 aa		13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	CDC34	P49427	236 aa	Predicted RBP	13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ZNF273	Q14593	569 aa		13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	OR4D10	Q8NGI6	311 aa		13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MIOX	Q9UGB7	285 aa		13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	FAM87A	P0C7U9	286 aa		13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	TAGLN	Q01995	201 aa	Known RBP	13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	FAM219A	Q8IW50	185 aa		13.71	□□□□□ -0.22
NCAPD3-213	ENST00000534532	C9orf172	C9J069	976 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ATP6V1G2-DDX39B	F2Z307	99 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GSTZ1	O43708	216 aa	Predicted RBP	13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	IGLV3-19	P01714	112 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	INPP5J	Q15735	1006 aa	Predicted RBP	13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ADIPOR1	Q96A54	375 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	AKIP1	Q9NQ31	210 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	IGKV3-7	A0A075B6H7	116 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	FAM24A	A6NFZ4	105 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PIGY	Q3MUY2	71 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RIPPLY2	Q5TAB7	128 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PDPN	Q86YL7	162 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	FCER1G	P30273	86 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GAMT	Q14353	236 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GAPT	Q8N292	157 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GCSAM	Q8N6F7	178 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RPS4Y2	Q8TD47	263 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	DTD1	Q8TEA8	209 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	WDFY2	Q96P53	400 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ASCL3	Q9NQ33	180 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MC5R	P33032	325 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	UBE2L3	P68036	154 aa	Known RBP	13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	COMMD1	Q8N668	190 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ABHD17A	Q96GS6	310 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	CCL28	Q9NRJ3	127 aa		13.7	□□□□□ -0.22
NCAPD3-213	ENST00000534532	CENPVL1	A0A0U1RR11	272 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SYNGR3	O43761	229 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PTP4A3	O75365	173 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RELL2	Q8NC24	303 aa	Predicted RBP	13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	TECR	Q9NZ01	308 aa	Known RBP	13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	HILPDA	Q9Y5L2	63 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	CACNA1G	O43497	2377 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	LOXL3	P58215	753 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	IL24	Q13007	206 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	DGAT2L7P	Q6IED9	249 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532		A1L4Q6	167 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MAP1LC3B2	A6NCE7	125 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	GDF9	O60383	454 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RAB32	Q13637	225 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	FA2H	Q7L5A8	372 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MAP1LC3B	Q9GZQ8	125 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532		Q9N2K0	584 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532		B9A039	149 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SOX15	O60248	233 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	OR8G5	Q8NG78	346 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	TMEM167B	Q9NRX6	74 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	FAM186A	A6NE01	2351 aa		13.69	□□□□□ -0.22
NCAPD3-213	ENST00000534532	REG1B	P48304	166 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	RAG2	P55895	527 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	OR1L6	Q8NGR2	347 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MS4A3	Q96HJ5	214 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	ABHD14A	Q9BUJ0	271 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	SCN3A	Q9NY46	2000 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	PGA4	P0DJD7	388 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	MUC15	Q8N387	334 aa		13.68	□□□□□ -0.22
NCAPD3-213	ENST00000534532	OR10G4	Q8NGN3	311 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms