RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 OR6M1Q8NGM8 313 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 OR4F5Q8NH21 305 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 ZNF596Q8TC21 504 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 MRGPRDQ8TDS7 321 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 C17orf50Q8WW18 174 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 FCGR1BQ92637 280 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 NCOR1P1Q9H4R4 102 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 BEX1Q9HBH7 125 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 CALYQ9NYX4 217 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 LRRC42Q9Y546 428 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 PEX16Q9Y5Y5 336 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 KIAA2026Q5HYC2 2103 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 DSCAML1Q8TD84 2053 aa10.88□□□□□ -0.67
CAPN1-227ENST00000533909 FAM172BPA6NC97 362 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A10PA6NDY2 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A18PA6NE21 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A16PA6NEW6 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A20PA6NIJ5 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A8PA6NJQ4 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A7PA6NKC0 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A22PA8MWA6 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A12PA8MX19 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A5PA8MXJ8 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A23PA8MXZ1 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A15PP0C7V4 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A13PP0C7W8 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A14PP0C7W9 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FAM90A24PP0C7X0 464 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 MYL9P24844 172 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 HTR1DP28221 377 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 PSMD7P51665 324 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 ARHGDIBP52566 201 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 PRRX1P54821 245 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 FABP5Q01469 135 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 RAB11BQ15907 218 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 LY6EQ16553 131 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 AANATQ16613 207 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 NKAPLQ5M9Q1 402 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 C1orf100Q5SVJ3 147 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 MINOS1Q5TGZ0 78 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 RSBN1Q5VWQ0 802 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-227ENST00000533909 SLC35E4Q6ICL7 350 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 BRICD5Q6PL45 260 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 TMEM91Q6ZNR0 172 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 LHFPL4Q7Z7J7 247 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 SPARTQ8N0X7 666 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 TMEM104Q8NE00 496 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 OR13A1Q8NGR1 328 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 KCNG3Q8TAE7 436 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 PLPPR1Q8TBJ4 325 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 MALSU1Q96EH3 234 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 NEDD4LQ96PU5 975 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 RAB18Q9NP72 206 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 RAB9BQ9NP90 201 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 NDUFB11Q9NX14 153 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 ETAA1Q9NY74 926 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 ZNF581Q9P0T4 197 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 AK6Q9Y3D8 172 aaKnown RBP10.87□□□□□ -0.67
CAPN1-227ENST00000533909 MINOS1-NBL1R4GNA1 71 aa10.87□□□□□ -0.67
CAPN1-227ENST00000533909 A0A1B0GUS0 222 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 AIPO00170 330 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 F2RL2O00254 374 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 CCRL2O00421 344 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 PDCD5O14737 125 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 MMP23AO75900 390 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 BPNT1O95861 308 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 IL1AP01583 271 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 FUT3P21217 361 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 PAX6P26367 422 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 CEACAM3P40198 252 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 GP2P55259 537 aaKnown RBP10.86□□□□□ -0.67
CAPN1-227ENST00000533909 PAX5Q02548 391 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 LTC4SQ16873 150 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 ZNF773Q6PK81 442 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 CCDC107Q8WV48 283 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 CREB3L1Q96BA8 519 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 Q96M66 194 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 TMEM59Q9BXS4 323 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 MEGF9Q9H1U4 602 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 TRAPPC2LQ9UL33 140 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 HILPDAQ9Y5L2 63 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 DNHD1Q96M86 4753 aa10.86□□□□□ -0.67
CAPN1-227ENST00000533909 TRAV39A0A0B4J263 110 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 SLC22A1O15245 554 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 ARSBP15848 533 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 GZMHP20718 246 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 P2RY14Q15391 338 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 SSX1Q16384 188 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 C17orf58Q2M2W7 97 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 UBE2UQ5VVX9 321 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 LYPD6Q86Y78 171 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 RFESDQ8TAC1 157 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 TAF15Q92804 592 aaKnown RBP eCLIP10.85□□□□□ -0.67
CAPN1-227ENST00000533909 ARL11Q969Q4 196 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 URM1Q9BTM9 101 aaKnown RBP10.85□□□□□ -0.67
CAPN1-227ENST00000533909 IDI2-AS1Q9NZ38 188 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 C1RLQ9NZP8 487 aa10.85□□□□□ -0.67
CAPN1-227ENST00000533909 RCC2Q9P258 522 aaKnown RBP10.85□□□□□ -0.67
CAPN1-227ENST00000533909 AMMECR1Q9Y4X0 333 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms