RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ABCA11PQ4W5N1 156 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 RSBN1Q5VWQ0 802 aaPredicted RBP12.36□□□□□ -0.43
CPSF1-211ENST00000533492 SUMF2Q8NBJ7 301 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 OR4F17Q8NGA8 305 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 OR13C5Q8NGS8 318 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 RFESDQ8TAC1 157 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 PLPPR1Q8TBJ4 325 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 MRGPRDQ8TDS7 321 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 GGHQ92820 318 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 ORAI1Q96D31 301 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 RBM14Q96PK6 669 aaKnown RBP12.36□□□□□ -0.43
CPSF1-211ENST00000533492 OR4F4Q96R69 305 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 OCSTAMPQ9BR26 566 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 DPCDQ9BVM2 203 aaPredicted RBP12.36□□□□□ -0.43
CPSF1-211ENST00000533492 IL36GQ9NZH8 169 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 TGP01266 2768 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 G3V4G9 280 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 LY6LH3BQJ8 138 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 J3QR06 171 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 LALBAP00709 142 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 FAM106CPP0CH98 169 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 ADARB1P78563 741 aaKnown RBP12.35□□□□□ -0.43
CPSF1-211ENST00000533492 RCN1Q15293 331 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 Q499Y3 187 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 YIF1BQ5BJH7 314 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 ATAD3CQ5T2N8 411 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 DMKNQ6E0U4 476 aaPredicted RBP12.35□□□□□ -0.43
CPSF1-211ENST00000533492 ZFP41Q8N8Y5 198 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 OR5AU1Q8NGC0 362 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 LEAP2Q969E1 77 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 TOMM40LQ969M1 308 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 ZNF184Q99676 751 aaPredicted RBP12.35□□□□□ -0.43
CPSF1-211ENST00000533492 HSPE1-MOB4S4R3N1 261 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 PLXNB1O43157 2135 aa12.35□□□□□ -0.43
CPSF1-211ENST00000533492 TRAV39A0A0B4J263 110 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 TRBV5-5A0A0J9YX44 114 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 EFCAB10A6NFE3 127 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 NPIPB11E5RHQ5 1161 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 M0QZK8 103 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 GEMIN2O14893 280 aaKnown RBP12.34□□□□□ -0.43
CPSF1-211ENST00000533492 XPNPEP2O43895 674 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 LPLP06858 475 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 GTF2F2P13984 249 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 GZMHP20718 246 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 RBM11P57052 281 aaKnown RBP12.34□□□□□ -0.43
CPSF1-211ENST00000533492 PAX5Q02548 391 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 GPR176Q14439 515 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 SLC22A6Q4U2R8 563 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 NHLRC3Q5JS37 347 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 C9orf152Q5JTZ5 239 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 UTF1Q5T230 341 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 LINC00596Q86U02 117 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 C8orf59Q8N0T1 100 aaPredicted RBP12.34□□□□□ -0.43
CPSF1-211ENST00000533492 OR10A7Q8NGE5 316 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 NEK7Q8TDX7 302 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 WIPF2Q8TF74 440 aaPredicted RBP12.34□□□□□ -0.43
CPSF1-211ENST00000533492 IFT22Q9H7X7 185 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 LINC00574Q9H8X3 128 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 PSG11Q9UQ72 335 aa12.34□□□□□ -0.43
CPSF1-211ENST00000533492 PNMA8CA0A1B0GUJ8 204 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 A0A1W2PPK0 400 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 TMEM30CPA0ZSE6 113 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 GPX5O75715 221 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 IGFBP3P17936 291 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-211ENST00000533492 SSTR5P35346 364 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 CAPGP40121 348 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 GNG10P50151 68 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 TAS2R43P59537 309 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 MADCAM1Q13477 382 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 SLC16A12Q6ZSM3 486 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 THNSL2Q86YJ6 484 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 STX19Q8N4C7 294 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 JAGN1Q8N5M9 183 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 OR10X1Q8NGY0 326 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 CNOT2Q9NZN8 540 aaKnown RBP12.33□□□□□ -0.44
CPSF1-211ENST00000533492 ZNF581Q9P0T4 197 aa12.33□□□□□ -0.44
CPSF1-211ENST00000533492 A0A1W2PRX2 142 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 MYL12BO14950 172 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 RAB7AP51149 207 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 RPS11P62280 158 aaKnown RBP eCLIP12.32□□□□□ -0.44
CPSF1-211ENST00000533492 CD83Q01151 205 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 HES1Q14469 280 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 SAMD5Q5TGI4 173 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 OR56B4Q8NH76 319 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 CCDC107Q8WV48 283 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 ARL11Q969Q4 196 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 PGLYRP3Q96LB9 341 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 OR14A2Q96R54 314 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 MRPS28Q9Y2Q9 187 aaKnown RBP12.32□□□□□ -0.44
CPSF1-211ENST00000533492 MOB4Q9Y3A3 225 aa12.32□□□□□ -0.44
CPSF1-211ENST00000533492 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 TRAV8-7A0A075B6U6 113 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 A0A1W2PP11 408 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 TCRBV4S1A1TA0A5B7 111 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-211ENST00000533492 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 MCRIP1C9JLW8 97 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 MAS1P04201 325 aa12.31□□□□□ -0.44
CPSF1-211ENST00000533492 SNRNP70P08621 437 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms