RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 FAM172BPA6NC97 362 aa18.78■□□□□ 0.6
SMPD1-209ENST00000533196 NPIPB11E5RHQ5 1161 aa18.78■□□□□ 0.6
SMPD1-209ENST00000533196 FSTP19883 344 aa18.78■□□□□ 0.6
SMPD1-209ENST00000533196 NFYBP25208 207 aa18.78■□□□□ 0.6
SMPD1-209ENST00000533196 RBM11P57052 281 aaKnown RBP18.78■□□□□ 0.6
SMPD1-209ENST00000533196 ST3GAL4Q11206 333 aa18.78■□□□□ 0.6
SMPD1-209ENST00000533196 RCN1Q15293 331 aa18.78■□□□□ 0.6
SMPD1-209ENST00000533196 NDUFA11Q86Y39 141 aa18.78■□□□□ 0.6
SMPD1-209ENST00000533196 C8orf59Q8N0T1 100 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-209ENST00000533196 DPCDQ9BVM2 203 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-209ENST00000533196 IDI2-AS1Q9NZ38 188 aa18.78■□□□□ 0.6
SMPD1-209ENST00000533196 OR2F2O95006 317 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 CDRT1O95170 752 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 CAPGP40121 348 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 GPR176Q14439 515 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 MPV17LQ2QL34 196 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 SUMF2Q8NBJ7 301 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 PLPPR1Q8TBJ4 325 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 PGLYRP3Q96LB9 341 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 RBM14Q96PK6 669 aaKnown RBP18.77■□□□□ 0.6
SMPD1-209ENST00000533196 OCSTAMPQ9BR26 566 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 SLC25A33Q9BSK2 321 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 PLCXD1Q9NUJ7 323 aa18.77■□□□□ 0.6
SMPD1-209ENST00000533196 NOTCH3Q9UM47 2321 aa18.76■□□□□ 0.59
SMPD1-209ENST00000533196 J3QR06 171 aa18.76■□□□□ 0.59
SMPD1-209ENST00000533196 M0QZK8 103 aa18.76■□□□□ 0.59
SMPD1-209ENST00000533196 CASQ2O14958 399 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-209ENST00000533196 OR7C1O76099 320 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-209ENST00000533196 CD1AP06126 327 aa18.76■□□□□ 0.59
SMPD1-209ENST00000533196 CD28P10747 220 aa18.76■□□□□ 0.59
SMPD1-209ENST00000533196 GZMHP20718 246 aa18.76■□□□□ 0.59
SMPD1-209ENST00000533196 RPS11P62280 158 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMPD1-209ENST00000533196 OGFRL1Q5TC84 451 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-209ENST00000533196 THNSL2Q86YJ6 484 aa18.76■□□□□ 0.59
SMPD1-209ENST00000533196 CDH26Q8IXH8 852 aa18.76■□□□□ 0.59
SMPD1-209ENST00000533196 RPEQ96AT9 228 aa18.76■□□□□ 0.59
SMPD1-209ENST00000533196 ZNF184Q99676 751 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-209ENST00000533196 RBM39Q14498 530 aaKnown RBP18.75■□□□□ 0.59
SMPD1-209ENST00000533196 Q6ZS46 218 aa18.75■□□□□ 0.59
SMPD1-209ENST00000533196 OR4F17Q8NGA8 305 aa18.75■□□□□ 0.59
SMPD1-209ENST00000533196 OR13C5Q8NGS8 318 aa18.75■□□□□ 0.59
SMPD1-209ENST00000533196 MRGPRDQ8TDS7 321 aa18.75■□□□□ 0.59
SMPD1-209ENST00000533196 THRSPQ92748 146 aa18.75■□□□□ 0.59
SMPD1-209ENST00000533196 OR4F4Q96R69 305 aa18.75■□□□□ 0.59
SMPD1-209ENST00000533196 PSORS1C1Q9UIG5 152 aa18.75■□□□□ 0.59
SMPD1-209ENST00000533196 FAM106CPP0CH98 169 aa18.74■□□□□ 0.59
SMPD1-209ENST00000533196 GTF2F2P13984 249 aa18.74■□□□□ 0.59
SMPD1-209ENST00000533196 SERPINA2P20848 420 aa18.74■□□□□ 0.59
SMPD1-209ENST00000533196 FBLIM1Q8WUP2 373 aa18.74■□□□□ 0.59
SMPD1-209ENST00000533196 TOMM40LQ969M1 308 aa18.74■□□□□ 0.59
SMPD1-209ENST00000533196 MRPS24Q96EL2 167 aaKnown RBP18.74■□□□□ 0.59
SMPD1-209ENST00000533196 SPACA1Q9HBV2 294 aa18.74■□□□□ 0.59
SMPD1-209ENST00000533196 TRBV5-7A0A0A0MS05 114 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 TMEM30CPA0ZSE6 113 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A18PA6NE21 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A16PA6NEW6 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A20PA6NIJ5 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A9PA6NNJ1 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A12PA8MX19 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A5PA8MXJ8 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 GEMIN2O14893 280 aaKnown RBP18.73■□□□□ 0.59
SMPD1-209ENST00000533196 MYL12BO14950 172 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 XPNPEP2O43895 674 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A15PP0C7V4 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A13PP0C7W8 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A14PP0C7W9 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 FAM90A24PP0C7X0 464 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 CD24P25063 80 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 MADCAM1Q13477 382 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 NSUN5P1Q3KNT7 163 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 STX19Q8N4C7 294 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 ORAI1Q96D31 301 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 OR5M11Q96RB7 305 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 CITED2Q99967 270 aaPredicted RBP18.73■□□□□ 0.59
SMPD1-209ENST00000533196 VCXQ9H320 206 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 PSG11Q9UQ72 335 aa18.73■□□□□ 0.59
SMPD1-209ENST00000533196 PRKDCP78527 4128 aaKnown RBP18.72■□□□□ 0.59
SMPD1-209ENST00000533196 RAB7AP51149 207 aa18.72■□□□□ 0.59
SMPD1-209ENST00000533196 WNT4P56705 351 aa18.72■□□□□ 0.59
SMPD1-209ENST00000533196 TMEM95Q3KNT9 176 aa18.72■□□□□ 0.59
SMPD1-209ENST00000533196 SLC22A6Q4U2R8 563 aa18.72■□□□□ 0.59
SMPD1-209ENST00000533196 UTF1Q5T230 341 aa18.72■□□□□ 0.59
SMPD1-209ENST00000533196 OR8H3Q8N146 312 aa18.72■□□□□ 0.59
SMPD1-209ENST00000533196 ZFP41Q8N8Y5 198 aa18.72■□□□□ 0.59
SMPD1-209ENST00000533196 OR52M1Q8NGK5 317 aa18.72■□□□□ 0.59
SMPD1-209ENST00000533196 OR14A2Q96R54 314 aa18.72■□□□□ 0.59
SMPD1-209ENST00000533196 TRAV8-7A0A075B6U6 113 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 GNAO1P09471 354 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 SSTR5P35346 364 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 CD83Q01151 205 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 ABCA11PQ4W5N1 156 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 ATAD3CQ5T2N8 411 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 HIST2H2BDQ6DRA6 164 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 LAIR2Q6ISS4 152 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 OR5AU1Q8NGC0 362 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 RFESDQ8TAC1 157 aa18.71■□□□□ 0.59
SMPD1-209ENST00000533196 MRPS28Q9Y2Q9 187 aaKnown RBP18.71■□□□□ 0.59
SMPD1-209ENST00000533196 ADARB2-AS1A8MUL3 147 aa18.7■□□□□ 0.58
SMPD1-209ENST00000533196 ORC5O43913 435 aa18.7■□□□□ 0.58
SMPD1-209ENST00000533196 TGP01266 2768 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms