RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 IFT22Q9H7X7 185 aa13.86□□□□□ -0.19
PHRF1-204ENST00000532550 FKBP14Q9NWM8 211 aa13.86□□□□□ -0.19
PHRF1-204ENST00000532550 SCN3BQ9NY72 215 aa13.86□□□□□ -0.19
PHRF1-204ENST00000532550 CALYQ9NYX4 217 aa13.86□□□□□ -0.19
PHRF1-204ENST00000532550 IDI2-AS1Q9NZ38 188 aa13.86□□□□□ -0.19
PHRF1-204ENST00000532550 TET2Q6N021 2002 aaPredicted RBP13.86□□□□□ -0.19
PHRF1-204ENST00000532550 MEGF11A6BM72 1044 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 FAM90A22PA8MWA6 464 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 BUB1B-PAK6H3BSN5 160 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 PEX14O75381 377 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 FSTP19883 344 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 PAX5Q02548 391 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 DOC2BQ14184 412 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 RBM39Q14498 530 aaKnown RBP13.85□□□□□ -0.19
PHRF1-204ENST00000532550 C2orf68Q2NKX9 166 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 MPV17LQ2QL34 196 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 HLA-DRB5Q30154 266 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 C6orf141Q5SZD1 244 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 CDH26Q8IXH8 852 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 OR9G1Q8NH87 305 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 RFESDQ8TAC1 157 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 MRGPRDQ8TDS7 321 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 THRSPQ92748 146 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 MYDGFQ969H8 173 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 KIRREL1Q96J84 757 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 ZNF702PQ9H963 129 aa13.85□□□□□ -0.19
PHRF1-204ENST00000532550 MRPS28Q9Y2Q9 187 aaKnown RBP13.85□□□□□ -0.19
PHRF1-204ENST00000532550 MAGEA13PA6NCF6 341 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 IL1AP01583 271 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 CDK1P06493 297 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 CSF1P09603 554 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 GZMHP20718 246 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 MAPK3P27361 379 aaPredicted RBP13.84□□□□□ -0.19
PHRF1-204ENST00000532550 MNDAP41218 407 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 BLCAPP62952 87 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 RNLSQ5VYX0 342 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 GLIPR1L1Q6UWM5 242 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 Q8N2B8 174 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 C11orf44Q8N8P7 122 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 OR10A7Q8NGE5 316 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 FAM110DQ8TAY7 271 aaPredicted RBP13.84□□□□□ -0.19
PHRF1-204ENST00000532550 NEK7Q8TDX7 302 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 CAPSLQ8WWF8 208 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 MUL1Q969V5 352 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 AKR1E2Q96JD6 320 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 DERL3Q96Q80 235 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 MND1Q9BWT6 205 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 MMP28Q9H239 520 aa13.84□□□□□ -0.19
PHRF1-204ENST00000532550 A0A1W2PP11 408 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 OOSP1A8MZH6 123 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 J3QR06 171 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 CD24P25063 80 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 HABP2Q14520 560 aaPredicted RBP13.83□□□□□ -0.2
PHRF1-204ENST00000532550 LTC4SQ16873 150 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 TPTE2P1Q5T6R2 138 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 AWAT2Q6E213 333 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 CCDC144NLQ6NUI1 221 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 C16orf82Q7Z2V1 217 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 MRPS24Q96EL2 167 aaKnown RBP13.83□□□□□ -0.2
PHRF1-204ENST00000532550 LINC00574Q9H8X3 128 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 SPACA1Q9HBV2 294 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 SERTAD4Q9NUC0 356 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 ZNF581Q9P0T4 197 aa13.83□□□□□ -0.2
PHRF1-204ENST00000532550 AMMECR1Q9Y4X0 333 aaPredicted RBP13.83□□□□□ -0.2
PHRF1-204ENST00000532550 TRAV39A0A0B4J263 110 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 TMEM30CPA0ZSE6 113 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 NPIPB11E5RHQ5 1161 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 LY6LH3BQJ8 138 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 PIN1P1O15428 100 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 IGHV3-7P01780 117 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 AQP4P55087 323 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 UTF1Q5T230 341 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 SLC16A12Q6ZSM3 486 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 MS4A15Q8N5U1 240 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 NRG4Q8WWG1 115 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 CFHR4Q92496 578 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 RPEQ96AT9 228 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 LIN7BQ9HAP6 207 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 PSG11Q9UQ72 335 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 VWFP04275 2813 aa13.82□□□□□ -0.2
PHRF1-204ENST00000532550 MCRIP1C9JLW8 97 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 TSPAN15O95858 294 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 SSTR5P35346 364 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 DEFA6Q01524 100 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 GABPB1Q06547 395 aaPredicted RBP13.81□□□□□ -0.2
PHRF1-204ENST00000532550 SPHARQ15513 63 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 MED22Q15528 200 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 ACSM3Q53FZ2 586 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 NKAIN3Q8N8D7 197 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 CCDC107Q8WV48 283 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 LEAP2Q969E1 77 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 ARL11Q969Q4 196 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 OR5M11Q96RB7 305 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 TPRKBQ9Y3C4 175 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 CMYA5Q8N3K9 4069 aa13.81□□□□□ -0.2
PHRF1-204ENST00000532550 CRTAPO75718 401 aaPredicted RBP13.8□□□□□ -0.2
PHRF1-204ENST00000532550 MT-ND4P03905 459 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 FAM106CPP0CH98 169 aa13.8□□□□□ -0.2
PHRF1-204ENST00000532550 VDAC2P45880 294 aaPredicted RBP13.8□□□□□ -0.2
PHRF1-204ENST00000532550 UNQ9370/PRO34162Q6UXP9 181 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms