RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	KIAA1671	Q9BY89	1806 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	MPV17	P39210	176 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ERVFRD-1	P60508	538 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	LINC00299	Q6ZSB3	139 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	GGN	Q86UU5	652 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	DTX1	Q86Y01	620 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	CDH26	Q8IXH8	852 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	CIB3	Q96Q77	187 aa	Predicted RBP	13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	TMUB1	Q9BVT8	246 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	G6PC2	Q9NQR9	355 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	RPL36A-HNRNPH2	H7BZ11	118 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	FGF12	P61328	243 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	HLA-DRB3	P79483	266 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ADGRG7	Q96K78	797 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	CCL28	Q9NRJ3	127 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	C3orf85	A0A1B0GTC6	90 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	MMD	Q15546	238 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	TMEM123	Q8N131	208 aa		13.51	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PPIAL4C	A0A0B4J2A2	164 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PPIAL4G	P0DN37	164 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PCNP	Q8WW12	178 aa	Known RBP	13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	DPF1	Q92782	380 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	OR5B12	Q96R08	314 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	WNT9B	O14905	357 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	UBE2V2	Q15819	145 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	AKIP1	Q9NQ31	210 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	KCNIP2	Q9NS61	270 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	GBF1	Q92538	1859 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	S100P	P25815	95 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	DAZAP1	Q96EP5	407 aa	Known RBP	13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	C1RL	Q9NZP8	487 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PSMB6	P28072	239 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	TIMP3	P35625	211 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	OPRK1	P41145	380 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	OPCML	Q14982	345 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	LRRC75A	Q8NAA5	344 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	OR4S2	Q8NH73	311 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	C20orf24	Q9BUV8	137 aa		13.5	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PTPRQ	Q9UMZ3	2332 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	OR5AC1	P0C628	307 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	TLE4	Q04727	773 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	OR52L2P	Q8NGH6	319 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	FAM168A	Q92567	244 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	SOX7	Q9BT81	388 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ARV1	Q9H2C2	271 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	COA4	Q9NYJ1	87 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504		A0A0G2JNJ9	132 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	CST7	O76096	145 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ONECUT2	O95948	504 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	DAO	P14920	347 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PSG7	Q13046	419 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	OR2G3	Q8NGZ4	309 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	LPAR3	Q9UBY5	353 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	CACNG5	Q9UF02	275 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504		Q9UFV3	132 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	MIOX	Q9UGB7	285 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	NOTCH2	Q04721	2471 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	LOC105371242	A0A075B767	164 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	GAPT	Q8N292	157 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	MEGF10	Q96KG7	1140 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	C2orf50	Q96LR7	162 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	TMEM106B	Q9NUM4	274 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	CA11	O75493	328 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	IL5	P05113	134 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	NPBWR2	P48146	333 aa		13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	RCL1	Q9Y2P8	373 aa	Known RBP	13.49	□□□□□ -0.25
PPFIA1-222	ENST00000532504	TRBV23-1	A0A0A0MS06	115 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	OR5H14	A6NHG9	310 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	NDUFA2	O43678	99 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	NPIPB7	O75200	414 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ACKR3	P25106	362 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	KIR2DL2	P43627	348 aa	Predicted RBP	13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	LCN2	P80188	198 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ST6GALNAC3	Q8NDV1	305 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	BORCS7	Q96B45	105 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	STARD4	Q96DR4	205 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ZNF486	Q96H40	463 aa	Predicted RBP	13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ADTRP	Q96IZ2	230 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PRR13	Q9NZ81	148 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	UBA52	P62987	128 aa	Known RBP	13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PPP1R1A	Q13522	171 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ACSM6	Q6P461	480 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	HARBI1	Q96MB7	349 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	RASL12	Q9NYN1	266 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ZNF407	Q9C0G0	2248 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	PPY	P01298	95 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	S100A9	P06702	114 aa	Known RBP	13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	LINC00596	Q86U02	117 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ZNRF1	Q8ND25	227 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	SNX22	Q96L94	193 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	UNKL	Q9H9P5	680 aa	Known RBP	13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	DCAF12L2	Q5VW00	463 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	ZNF596	Q8TC21	504 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	FLYWCH2	Q96CP2	140 aa	Known RBP	13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	SCMH1	Q96GD3	660 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	WFIKKN1	Q96NZ8	548 aa		13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.48	□□□□□ -0.25
PPFIA1-222	ENST00000532504		F8W036	122 aa		13.47	□□□□□ -0.25
PPFIA1-222	ENST00000532504	IFNL4	K9M1U5	179 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms