RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 GPR157Q5UAW9 335 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 ZNF497Q6ZNH5 498 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 ZNF565Q8N9K5 539 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 NDNFQ8TB73 568 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 LHX4Q969G2 390 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 FAAP24Q9BTP7 215 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 ATG5Q9H1Y0 275 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 TAS2R3Q9NYW6 316 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 WNK2Q9Y3S1 2297 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 C17orf98A8MV24 154 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 FSHBP01225 129 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 DLX6P56179 175 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 ERVFRD-1P60508 538 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 SCGB2A2Q13296 93 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 KLF17Q5JT82 389 aaPredicted RBP18.28■□□□□ 0.52
LRRK1-208ENST00000532029 NCR3LG1Q68D85 454 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 Q6ZTK2 550 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 SULT4A1Q9BR01 284 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 NUP50Q9UKX7 468 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 HSF4Q9ULV5 492 aa18.28■□□□□ 0.52
LRRK1-208ENST00000532029 IGHV3OR16-10A0A075B7F0 116 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 ZNF729A6NN14 1252 aaPredicted RBP18.27■□□□□ 0.52
LRRK1-208ENST00000532029 RBP4P02753 201 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 MT-ND4P03905 459 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 FAM157CP0CG43 387 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 IGHV4-38-2P0DP08 117 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 RORCP51449 518 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 OR13A1Q8NGR1 328 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 OR5H6Q8NGV6 325 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 OR10R2Q8NGX6 335 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 DYRK2Q92630 601 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 KCTD12Q96CX2 325 aaKnown RBP18.27■□□□□ 0.52
LRRK1-208ENST00000532029 RAB3CQ96E17 227 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 ARHGAP5-AS1Q96IT6 56 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 UNKLQ9H9P5 680 aaKnown RBP18.27■□□□□ 0.52
LRRK1-208ENST00000532029 SPATA2Q9UM82 520 aa18.27■□□□□ 0.52
LRRK1-208ENST00000532029 SONP18583 2426 aaKnown RBP18.26■□□□□ 0.51
LRRK1-208ENST00000532029 CCDC160A6NGH7 325 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 FOXI3A8MTJ6 420 aaPredicted RBP18.26■□□□□ 0.51
LRRK1-208ENST00000532029 CLPXO76031 633 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 SCGNO76038 276 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 TMEM50BP56557 158 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 ZNF782Q6ZMW2 699 aaPredicted RBP18.26■□□□□ 0.51
LRRK1-208ENST00000532029 C11orf42Q8N5U0 333 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 MRGPRDQ8TDS7 321 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 CCDC107Q8WV48 283 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 PHF21AQ96BD5 680 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 ISOC1Q96CN7 298 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 PECRQ9BY49 303 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 HEXA-AS1Q9H8Q6 139 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 RHBDL2Q9NX52 303 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 TRAPPC2LQ9UL33 140 aa18.26■□□□□ 0.51
LRRK1-208ENST00000532029 NSD1Q96L73 2696 aaPredicted RBP18.26■□□□□ 0.51
LRRK1-208ENST00000532029 ZFHX3Q15911 3703 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 TRAV39A0A0B4J263 110 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 CENPVL3A0A0U1RRI6 287 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 IGHV1-8P0DP01 117 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 HOXB4P17483 251 aaPredicted RBP18.25■□□□□ 0.51
LRRK1-208ENST00000532029 EPHA1P21709 976 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 DLX1P56177 255 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 GUCA2AQ02747 115 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 PRB3Q04118 309 aaPredicted RBP18.25■□□□□ 0.51
LRRK1-208ENST00000532029 MOGAT2Q3SYC2 334 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 PDZD9Q8IXQ8 264 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 OR4K15Q8NH41 348 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 TNFRSF14Q92956 283 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 MS4A7Q9GZW8 240 aaPredicted RBP18.25■□□□□ 0.51
LRRK1-208ENST00000532029 CHMP1AQ9HD42 196 aaPredicted RBP18.25■□□□□ 0.51
LRRK1-208ENST00000532029 CALYQ9NYX4 217 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 CEPT1Q9Y6K0 416 aa18.25■□□□□ 0.51
LRRK1-208ENST00000532029 SETD2Q9BYW2 2564 aaPredicted RBP18.24■□□□□ 0.51
LRRK1-208ENST00000532029 IGHV1-69DA0A0B4J2H0 117 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 KBTBD11-OT1A0A1B0GTJ5 212 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 RAB27BO00194 218 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 IGHV1-69P01742 117 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 GZMHP20718 246 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 FPR2P25090 351 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 BPIFB3P59826 476 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 KLRD1Q13241 179 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 SPCS2Q15005 226 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 ARL6IP1Q15041 203 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 PLAC9Q5JTB6 97 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 C6orf183Q5T699 404 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 GAPTQ8N292 157 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 ACOT12Q8WYK0 555 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 AP3S1Q92572 193 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 CYYR1Q96J86 154 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 SESN1Q9Y6P5 492 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 NF1P21359 2839 aa18.24■□□□□ 0.51
LRRK1-208ENST00000532029 FN1P02751 2386 aaKnown RBP18.24■□□□□ 0.51
LRRK1-208ENST00000532029 A0A075B6Q4 140 aa18.23■□□□□ 0.51
LRRK1-208ENST00000532029 RNASEK-C17orf49H0YIS7 233 aa18.23■□□□□ 0.51
LRRK1-208ENST00000532029 H3BMQ9 156 aa18.23■□□□□ 0.51
LRRK1-208ENST00000532029 ZNF182P17025 639 aaPredicted RBP18.23■□□□□ 0.51
LRRK1-208ENST00000532029 COX7A1P24310 79 aa18.23■□□□□ 0.51
LRRK1-208ENST00000532029 CDK2P24941 298 aa18.23■□□□□ 0.51
LRRK1-208ENST00000532029 SOX6P35712 828 aa18.23■□□□□ 0.51
LRRK1-208ENST00000532029 MRPS15P82914 257 aaKnown RBP18.23■□□□□ 0.51
LRRK1-208ENST00000532029 PRAMEF5Q5TYX0 476 aa18.23■□□□□ 0.51
LRRK1-208ENST00000532029 OR52W1Q6IF63 320 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms