RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	ZNF726	A6NNF4	738 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TCF21	O43680	179 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967		P01737	135 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IL3	P08700	152 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SLC35G6	P0C7Q6	338 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GABRA1	P14867	456 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SELE	P16581	610 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RAB3B	P20337	219 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CD34	P28906	385 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CD38	P28907	300 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SPR	P35270	261 aa	Predicted RBP	4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RIPPLY3	P57055	190 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	KLF3	P57682	345 aa	Predicted RBP	4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TPI1	P60174	286 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CKS1B	P61024	79 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MAX	P61244	160 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GNA12	Q03113	381 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CD47	Q08722	323 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CGB2	Q6NT52	195 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF66	Q6ZN08	573 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FAM183BP	Q6ZVS7	135 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CBR4	Q8N4T8	237 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF614	Q8N883	585 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	C4orf32	Q8N8J7	132 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	OR5J2	Q8NH18	312 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967		Q8TCH9	128 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CYGB	Q8WWM9	190 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FGF14	Q92915	247 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	DCUN1D1	Q96GG9	259 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	KIR2DL4	Q99706	377 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	METTL1	Q9UBP6	276 aa	Known RBP	4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	VAX2	Q9UIW0	290 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TP53BP1	Q12888	1972 aa	Predicted RBP	4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TNS3	Q68CZ2	1445 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SLX4	Q8IY92	1834 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RLF	Q13129	1914 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IGLV5-45	A0A087WSX0	123 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PATE3	B3GLJ2	98 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MFSD11	O43934	449 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PMS2P2	O95744	297 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SEMA4F	O95754	770 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	AIFM1	O95831	613 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IGHV4-39	P01824	125 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	OR56A5	P0C7T3	313 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	GPX2	P18283	190 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	AK4	P27144	223 aa	Predicted RBP	4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SLC35A2	P78381	396 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RUNX1	Q01196	453 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	EMX2	Q04743	252 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MLF2	Q15773	248 aa	Predicted RBP	4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	NRF1	Q16656	503 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TCTEX1D4	Q5JR98	221 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CNIH2	Q6PI25	160 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF491	Q8N8L2	437 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	AQP11	Q8NBQ7	271 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MFSD8	Q8NHS3	518 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LINC00476	Q8WZB0	136 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IL22RA2	Q969J5	263 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ST6GAL2	Q96JF0	529 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CCDC32	Q9BV29	185 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CHST5	Q9GZS9	411 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FBXO7	Q9Y3I1	522 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LAMB2	P55268	1798 aa		4.23	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IGHV1OR21-1	A0A087WYE8	117 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IGHV4-61	A0A0C4DH41	118 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CIB4	A0PJX0	185 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MAP1LC3B2	A6NCE7	125 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RBMY1B	A6NDE4	496 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RBMY1E	A6NEQ0	496 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967		E9PLD3	99 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LINC01619	G3V211	115 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CYB5B	O43169	146 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MOS	P00540	346 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	IGHV4-59	P01825	116 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RBMY1D	P0C7P1	496 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RBMY1A1	P0DJD3	496 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	T-ENOL	P0DO92	83 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RCC1	P18754	421 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PSMB9	P28065	219 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	CSRP3	P50461	194 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PRDX1	Q06830	199 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF616	Q08AN1	781 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	HNRNPA0	Q13151	305 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	ZNF266	Q14584	549 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	HENMT1	Q5T8I9	393 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LCE2A	Q5TA79	106 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	LCE2C	Q5TA81	110 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	TEX36	Q5VZQ5	186 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PACRGL	Q8N7B6	248 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	BLNK	Q8WV28	456 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	SRSF12	Q8WXF0	261 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RGP1	Q92546	391 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FAM19A4	Q96LR4	140 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PITX2	Q99697	317 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	EMC6	Q9BV81	110 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MAP1LC3B	Q9GZQ8	125 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	FAM96A	Q9H5X1	160 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	MED11	Q9P086	117 aa		4.22	□□□□□ -1.73
ECHDC1-222	ENST00000531967	PSG8	Q9UQ74	426 aa		4.22	□□□□□ -1.73

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