RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 OR5D18Q8NGL1 313 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 OR10AC1Q8NH08 325 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 TOMM40LQ969M1 308 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 CREB3L1Q96BA8 519 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 SPSB1Q96BD6 273 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 RNFT2Q96EX2 444 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 ADAT3Q96EY9 351 aaPredicted RBP6.99□□□□□ -1.29
USF1-210ENST00000531842 COQ2Q96H96 371 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 OPALINQ96PE5 141 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 HSPB9Q9BQS6 159 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 C9orf16Q9BUW7 83 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 ALX4Q9H161 411 aaPredicted RBP6.99□□□□□ -1.29
USF1-210ENST00000531842 ISG20L2Q9H9L3 353 aaKnown RBP6.99□□□□□ -1.29
USF1-210ENST00000531842 GNB4Q9HAV0 340 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 EDA2RQ9HAV5 297 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 SEBOXQ9HB31 216 aaPredicted RBP6.99□□□□□ -1.29
USF1-210ENST00000531842 HMG20AQ9NP66 347 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 FRRS1LQ9P0K9 344 aa6.99□□□□□ -1.29
USF1-210ENST00000531842 IGKV1-9A0A0C4DH69 117 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 IGKV1-12A0A0C4DH73 117 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 DAPL1A0PJW8 107 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 ODAMA1E959 279 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 E9PI62 339 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 M0QZK8 103 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 HSPB6O14558 160 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 DEGS1O15121 323 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 OR2H2O95918 312 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 IGKV1D-12P01611 117 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 IGHG2P01859 326 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 FAM106CPP0CH98 169 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 DBTP11182 482 aaKnown RBP6.98□□□□□ -1.29
USF1-210ENST00000531842 PTGFRP43088 359 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 GNB1P62873 340 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 KIR2DS1Q14954 304 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 ATXN7L3Q14CW9 347 aaPredicted RBP6.98□□□□□ -1.29
USF1-210ENST00000531842 KRBOX4Q5JUW0 171 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 CCDC144NLQ6NUI1 221 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 OR11H1Q8NG94 326 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 OR51A4Q8NGJ6 313 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 OR13C3Q8NGS6 347 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 OR8U1Q8NH10 309 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 PELI1Q96FA3 418 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 SPACA5Q96QH8 159 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 KLK15Q9H2R5 256 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 IMPAD1Q9NX62 359 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 TAS2R3Q9NYW6 316 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 KIAA1456Q9P272 454 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 GMPPBQ9Y5P6 360 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 HERC2O95714 4834 aa6.98□□□□□ -1.29
USF1-210ENST00000531842 OR4C45A6NMZ5 311 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 NCBP2LA6PVI3 153 aaKnown RBP6.97□□□□□ -1.29
USF1-210ENST00000531842 ZNF736B4DX44 427 aaPredicted RBP6.97□□□□□ -1.29
USF1-210ENST00000531842 J3QLW9 94 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 BAG2O95816 211 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 LIMS3P0CW19 117 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 LIMS4P0CW20 117 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 TMEM225BP0DP42 221 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 ZNF19P17023 458 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 CD34P28906 385 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 GPR12P47775 334 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 SLC35B1P78383 322 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 ADARB1P78563 741 aaKnown RBP6.97□□□□□ -1.29
USF1-210ENST00000531842 GPR50Q13585 617 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 FHL3Q13643 280 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 PNLIPRP3Q17RR3 467 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 LRRC36Q1X8D7 754 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 MEDAGQ5VYS4 303 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 XAF1Q6GPH4 301 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 FDX2Q6P4F2 183 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 TEX38Q6PEX7 206 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 UTS2BQ765I0 119 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 KCTD20Q7Z5Y7 419 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 LHFPL3Q86UP9 236 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 ZNF565Q8N9K5 539 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 OR52I1Q8NGK6 324 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 OR13A1Q8NGR1 328 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 OR13C9Q8NGT0 318 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 OR2G2Q8NGZ5 317 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 RFESDQ8TAC1 157 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 UBALD1Q8TB05 177 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 DCUN1D4Q92564 292 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 CORO2AQ92828 525 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 RPEQ96AT9 228 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 KIRREL1Q96J84 757 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 NR1H4Q96RI1 486 aaPredicted RBP6.97□□□□□ -1.29
USF1-210ENST00000531842 RETNQ9HD89 108 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 ISYNA1Q9NPH2 558 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 MRPS18AQ9NVS2 196 aaKnown RBP6.97□□□□□ -1.29
USF1-210ENST00000531842 ZNF581Q9P0T4 197 aa6.97□□□□□ -1.29
USF1-210ENST00000531842 NKX1-2Q9UD57 310 aaPredicted RBP6.97□□□□□ -1.29
USF1-210ENST00000531842 ZMAT5Q9UDW3 170 aaKnown RBP6.97□□□□□ -1.29
USF1-210ENST00000531842 J3QR06 171 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 KDM4BO94953 1096 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 ISG15P05161 165 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 HTR1AP08908 422 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 GNAO1P09471 354 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 GLP1RP43220 463 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 CDX1P47902 265 aaPredicted RBP6.96□□□□□ -1.3
USF1-210ENST00000531842 SLURP1P55000 103 aa6.96□□□□□ -1.3
USF1-210ENST00000531842 KIAA0141Q14154 515 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms