RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CXorf1O96002 111 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 ASS1P00966 412 aaKnown RBP2.67□□□□□ -1.98
USP47-211ENST00000531513 LHBP01229 141 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 APOEP02649 317 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 C8orf88P0DMB2 117 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 SLC6A1P30531 599 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 HAAOP46952 286 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 SKP2Q13309 424 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 TMEM241Q24JQ0 296 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 UNQ9165/PRO28630Q6UXU0 137 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 SPNS3Q6ZMD2 512 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 TIFABQ6ZNK6 161 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 CLDN23Q96B33 292 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 PPP1R36Q96LQ0 422 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 IP6K3Q96PC2 410 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 TMEM208Q9BTX3 173 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 CCDC94Q9BW85 323 aaPredicted RBP2.67□□□□□ -1.98
USP47-211ENST00000531513 SLC22A4Q9H015 551 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 IL37Q9NZH6 218 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 OPN4Q9UHM6 478 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 CLUHO75153 1309 aa2.67□□□□□ -1.98
USP47-211ENST00000531513 PLB1Q6P1J6 1458 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 METTL15A6NJ78 407 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 LRRN3E7EW58 273 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 H0Y980 276 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 AZIN1O14977 448 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 STX10O60499 249 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 IL4P05112 153 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 GTF2F2P13984 249 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 TGFBR1P36897 503 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 IFNGR2P38484 337 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 HSPA13P48723 471 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 ZNF83P51522 516 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 PFN3P60673 137 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 GTF2BQ00403 316 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 ZNF616Q08AN1 781 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 VN1R4Q7Z5H5 301 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 MARCH3Q86UD3 253 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 CPNE9Q8IYJ1 553 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 KRT222Q8N1A0 295 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 MIR7-3HGQ8N6C7 128 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 TMEM105Q8N8V8 129 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 OR2K2Q8NGT1 345 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 ITLN2Q8WWU7 325 aaPredicted RBP2.66□□□□□ -1.98
USP47-211ENST00000531513 TAMM41Q96BW9 452 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 PPCDCQ96CD2 204 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 CHMP6Q96FZ7 201 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 FGFR1OP2Q9NVK5 253 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 FAM206AQ9NX38 181 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 EMC3Q9P0I2 261 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 BTRCQ9Y297 605 aa2.66□□□□□ -1.98
USP47-211ENST00000531513 DNMT1P26358 1616 aaKnown RBP2.66□□□□□ -1.98
USP47-211ENST00000531513 ARAP3Q8WWN8 1544 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 SSNA1O43805 119 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 IGHV1-46P01743 117 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 OR5AC1P0C628 307 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 CD99P14209 185 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 CNTFRP26992 372 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 ADORA1P30542 326 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 HOXA6P31267 233 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 MPV17P39210 176 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 MP68P56378 58 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 SMAGPQ0VAQ4 97 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 FUT5Q11128 374 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 FADDQ13158 208 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 UAP1Q16222 522 aaPredicted RBP2.65□□□□□ -1.99
USP47-211ENST00000531513 ABCA11PQ4W5N1 156 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 OGFRL1Q5TC84 451 aaPredicted RBP2.65□□□□□ -1.99
USP47-211ENST00000531513 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 FAM19A3Q7Z5A8 133 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 Q8N402 240 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 C2orf15Q8WU43 125 aaKnown RBP2.65□□□□□ -1.99
USP47-211ENST00000531513 RTN4IP1Q8WWV3 396 aaPredicted RBP2.65□□□□□ -1.99
USP47-211ENST00000531513 ZNF285Q96NJ3 590 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 PEBP4Q96S96 227 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 MS4A6AQ9H2W1 248 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 LINC00574Q9H8X3 128 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 FAM60AQ9NP50 221 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 HMGXB4Q9UGU5 601 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.65□□□□□ -1.99
USP47-211ENST00000531513 SNX10Q9Y5X0 201 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 PLA2R1Q13018 1463 aa2.65□□□□□ -1.99
USP47-211ENST00000531513 ABCC11Q96J66 1382 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 NACAE9PAV3 2078 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 IGKV2D-24A0A075B6R9 120 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 TMEM210A6NLX4 147 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 F5H5T6 163 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 GOLGA6L19H0YKK7 550 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 M0QYV0 167 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 PFDN6O15212 129 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 ZNF324O75467 553 aaPredicted RBP2.64□□□□□ -1.99
USP47-211ENST00000531513 NQO1P15559 274 aaKnown RBP2.64□□□□□ -1.99
USP47-211ENST00000531513 CFL1P23528 166 aaKnown RBP2.64□□□□□ -1.99
USP47-211ENST00000531513 CD79BP40259 229 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 TGM4P49221 684 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 ELP2Q6IA86 826 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 DPPA2Q7Z7J5 298 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 ST20-AS1Q8NBB2 130 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 OR5D18Q8NGL1 313 aa2.64□□□□□ -1.99
USP47-211ENST00000531513 OR11L1Q8NGX0 322 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms