RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TGFBR3Q03167 851 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 TGIF1Q15583 401 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 OR2C3Q8N628 320 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 RTL8AQ9BWD3 113 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 TMEM231Q9H6L2 316 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 NDRG3Q9UGV2 375 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 STRAPQ9Y3F4 350 aaKnown RBP14.68□□□□□ -0.06
BRCA2-204ENST00000530893 GPR179Q6PRD1 2367 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 TRAV24A0A0B4J272 114 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 IGKV1-6A0A0C4DH72 117 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 NKX2-6A6NCS4 301 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 HSPB6O14558 160 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 ZNHIT1O43257 154 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 WNT2P09544 360 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 UCP2P55851 309 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 ZNF266Q14584 549 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 FAM76BQ5HYJ3 339 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 PCSK4Q6UW60 755 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 OR5D13Q8NGL4 314 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 KIRREL1Q96J84 757 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 AIFM2Q9BRQ8 373 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 CABLES2Q9BTV7 478 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 R4GN57 208 aa14.68□□□□□ -0.06
BRCA2-204ENST00000530893 ARID1AO14497 2285 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 IGKV1D-13A0A0B4J2D9 117 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 LRP5LA4QPB2 252 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 NPIPB11E5RHQ5 1161 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 DEGS1O15121 323 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 IGKV1-13P0DP09 117 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 CA6P23280 308 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 HLA-DRB3P79483 266 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 EWSR1Q01844 656 aaKnown RBP eCLIP14.67□□□□□ -0.06
BRCA2-204ENST00000530893 HMGN3Q15651 99 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 NMSQ5H8A3 153 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 OR2T2Q6IF00 324 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 MOB1BQ7L9L4 216 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 OR10J5Q8NHC4 309 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 SNIP1Q8TAD8 396 aaKnown RBP14.67□□□□□ -0.06
BRCA2-204ENST00000530893 SLC25A31Q9H0C2 315 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 WFDC1Q9HC57 220 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 POLDIP2Q9Y2S7 368 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 FAM96BQ9Y3D0 163 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 OR2W1Q9Y3N9 320 aa14.67□□□□□ -0.06
BRCA2-204ENST00000530893 LILRA1O75019 489 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 TSPAN15O95858 294 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 SFTA3P0C7M3 94 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 ZNF14P17017 642 aaPredicted RBP14.66□□□□□ -0.06
BRCA2-204ENST00000530893 TNFSF10P50591 281 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 NHLH2Q02577 135 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 TRIP6Q15654 476 aaKnown RBP14.66□□□□□ -0.06
BRCA2-204ENST00000530893 RNFT1Q5M7Z0 435 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 SHEQ5VZ18 495 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 BSCL2Q96G97 398 aaPredicted RBP14.66□□□□□ -0.06
BRCA2-204ENST00000530893 PLEKHF2Q9H8W4 249 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 DLL3Q9NYJ7 618 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 HS3ST1O14792 307 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 HEXAP06865 529 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 P4HA3Q7Z4N8 544 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 CCL28Q9NRJ3 127 aa14.66□□□□□ -0.06
BRCA2-204ENST00000530893 LYRM2Q9NU23 88 aaPredicted RBP14.66□□□□□ -0.06
BRCA2-204ENST00000530893 FAM157AC9JC47 383 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 CD80P33681 288 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 ZNF324BQ6AW86 544 aaPredicted RBP14.65□□□□□ -0.06
BRCA2-204ENST00000530893 CLEC9AQ6UXN8 241 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 C20orf204Q6ZNR8 217 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 H1FOOQ8IZA3 346 aaPredicted RBP14.65□□□□□ -0.06
BRCA2-204ENST00000530893 LILRB1Q8NHL6 650 aaPredicted RBP14.65□□□□□ -0.06
BRCA2-204ENST00000530893 RDH5Q92781 318 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 ZNF488Q96MN9 340 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 CACFD1Q9UGQ2 172 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 ATP6V1G2-DDX39BF2Z307 99 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 HSD17B6O14756 317 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 ADAM20O43506 726 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 SMPD2O60906 423 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 PITX3O75364 302 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 PGLYRP1O75594 196 aaPredicted RBP14.65□□□□□ -0.06
BRCA2-204ENST00000530893 CNOT4O95628 575 aaKnown RBP14.65□□□□□ -0.06
BRCA2-204ENST00000530893 IGHG3P01860 377 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 OR8U9P0C7N5 309 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 SLC25A6P12236 298 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 HOXB1P14653 301 aaPredicted RBP14.65□□□□□ -0.06
BRCA2-204ENST00000530893 ZNF44P15621 663 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 F2RP25116 425 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 SNCAP37840 140 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 NOVA1P51513 510 aaKnown RBP14.65□□□□□ -0.06
BRCA2-204ENST00000530893 UBE2NP61088 152 aaKnown RBP14.65□□□□□ -0.06
BRCA2-204ENST00000530893 FLI1Q01543 452 aaPredicted RBP14.65□□□□□ -0.06
BRCA2-204ENST00000530893 ID3Q02535 119 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 BAXQ07812 192 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 ATP1A1-AS1Q5TC04 95 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 Q6P435 159 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 OR8U1Q8NH10 309 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 KPTNQ9Y664 436 aa14.65□□□□□ -0.06
BRCA2-204ENST00000530893 H7C2Y5 167 aa14.64□□□□□ -0.07
BRCA2-204ENST00000530893 RAC2P15153 192 aa14.64□□□□□ -0.07
BRCA2-204ENST00000530893 CAMLGP49069 296 aa14.64□□□□□ -0.07
BRCA2-204ENST00000530893 ERVK11-1P61568 191 aa14.64□□□□□ -0.07
BRCA2-204ENST00000530893 PPP1CBP62140 327 aa14.64□□□□□ -0.07
BRCA2-204ENST00000530893 VAMP2P63027 116 aa14.64□□□□□ -0.07
BRCA2-204ENST00000530893 PEA15Q15121 130 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms