RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 SPEGQ15772 3267 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 SH2D1BO14796 132 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 MPPED1O15442 326 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 CYB5BO43169 146 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 ENSAO43768 121 aaKnown RBP10.72□□□□□ -0.69
SCN3B-206ENST00000530277 ECI1P42126 302 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 DCAF10Q5QP82 559 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 ZNF787Q6DD87 383 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 BIVMQ86UB2 503 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 WDFY1Q8IWB7 410 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 NFAM1Q8NET5 270 aaPredicted RBP10.72□□□□□ -0.69
SCN3B-206ENST00000530277 PSG11Q9UQ72 335 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 LINC00587B1AMM8 73 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 CRYBA1P05813 215 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 ARR3P36575 388 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 RAB13P51153 203 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 MIOXQ9UGB7 285 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 PILRBQ9UKJ0 227 aa10.72□□□□□ -0.69
SCN3B-206ENST00000530277 A0A1W2PPE3 182 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 CTSDP07339 412 aaPredicted RBP10.71□□□□□ -0.69
SCN3B-206ENST00000530277 HOXA1P49639 335 aaPredicted RBP10.71□□□□□ -0.69
SCN3B-206ENST00000530277 SRSF3P84103 164 aaKnown RBP10.71□□□□□ -0.69
SCN3B-206ENST00000530277 ENDOGQ14249 297 aaKnown RBP10.71□□□□□ -0.69
SCN3B-206ENST00000530277 LIAT1Q6ZQX7 453 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 OR2M7Q8NG81 312 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 OR4F5Q8NH21 305 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 OR4A16Q8NH70 328 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 SIGLEC12Q96PQ1 595 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 OR4F4Q96R69 305 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 SLC26A1Q9H2B4 701 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 ARV1Q9H2C2 271 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 TMEM9BQ9NQ34 198 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 TUBAL3A6NHL2 446 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 ZIC3O60481 467 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 SNCAP37840 140 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 TMEM251Q8N6I4 163 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 TMEM105Q8N8V8 129 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 SCCPDHQ8NBX0 429 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 RCC2Q9P258 522 aaKnown RBP10.71□□□□□ -0.69
SCN3B-206ENST00000530277 ZNF391Q9UJN7 358 aa10.71□□□□□ -0.69
SCN3B-206ENST00000530277 NCOA6Q14686 2063 aaPredicted RBP10.71□□□□□ -0.7
SCN3B-206ENST00000530277 A0A0A6YYD4 124 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 A0A1W2PPQ1 181 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 RNF222A6NCQ9 220 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 MBPP02686 304 aaPredicted RBP10.71□□□□□ -0.7
SCN3B-206ENST00000530277 G0S2P27469 103 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 MPGP29372 298 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 FABP9Q0Z7S8 132 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 Q3ZCU0 254 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 PPP1R35Q8TAP8 253 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 FGFBP3Q8TAT2 258 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 NMES1Q9C002 83 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 WSB1Q9Y6I7 421 aa10.71□□□□□ -0.7
SCN3B-206ENST00000530277 ATRXP46100 2492 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 ACTL6AO96019 429 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 HPP00738 406 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 SSX2Q16385 188 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 FDX2Q6P4F2 183 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 RBMS3Q6XE24 437 aaKnown RBP10.7□□□□□ -0.7
SCN3B-206ENST00000530277 OR2D2Q9H210 308 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 POLDIP2Q9Y2S7 368 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 NKX2-8O15522 239 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 TFF1P04155 84 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 FBP1P09467 338 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 PSG2P11465 335 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 GNG10P50151 68 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 STARD6P59095 220 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 ZNF528Q3MIS6 628 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 WFDC8Q8IUA0 241 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 M1APQ8TC57 530 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 KCNMB2Q9Y691 235 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 MED13Q9UHV7 2174 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 ZNF705FA8MVS1 300 aaPredicted RBP10.7□□□□□ -0.7
SCN3B-206ENST00000530277 H0YIZ8 118 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 MFNGO00587 321 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 SPINT2O43291 252 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 UMODP07911 640 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 ZNF705DP0CH99 300 aaPredicted RBP10.7□□□□□ -0.7
SCN3B-206ENST00000530277 ZNF705BP0CI00 300 aaPredicted RBP10.7□□□□□ -0.7
SCN3B-206ENST00000530277 AESQ08117 197 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 MDP1Q86V88 176 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 LRP11Q86VZ4 500 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 ANGPTL4Q9BY76 406 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 TTTY12Q9BZ98 90 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 PLXNA2O75051 1894 aa10.7□□□□□ -0.7
SCN3B-206ENST00000530277 C7orf77A4D0Y5 90 aa10.69□□□□□ -0.7
SCN3B-206ENST00000530277 SPINK4O60575 86 aa10.69□□□□□ -0.7
SCN3B-206ENST00000530277 PPP1CCP36873 323 aaKnown RBP10.69□□□□□ -0.7
SCN3B-206ENST00000530277 SMIM7Q9BQ49 75 aa10.69□□□□□ -0.7
SCN3B-206ENST00000530277 RSG1Q9BU20 258 aa10.69□□□□□ -0.7
SCN3B-206ENST00000530277 ZNF552Q9H707 407 aaPredicted RBP10.69□□□□□ -0.7
SCN3B-206ENST00000530277 FAM208BQ5VWN6 2430 aa10.69□□□□□ -0.7
SCN3B-206ENST00000530277 KIF26AQ9ULI4 1882 aaPredicted RBP10.69□□□□□ -0.7
SCN3B-206ENST00000530277 GTF3C1Q12789 2109 aa10.69□□□□□ -0.7
SCN3B-206ENST00000530277 PINX1Q96BK5 328 aaKnown RBP10.69□□□□□ -0.7
SCN3B-206ENST00000530277 DYNLRB1Q9NP97 96 aa10.69□□□□□ -0.7
SCN3B-206ENST00000530277 FOXJ2Q9P0K8 574 aa10.69□□□□□ -0.7
SCN3B-206ENST00000530277 TMED3Q9Y3Q3 217 aa10.69□□□□□ -0.7
SCN3B-206ENST00000530277 KIAA1671Q9BY89 1806 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms