RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 TNFSF4P23510 183 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 PTAFRP25105 342 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 S100GP29377 79 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 SSTR2P30874 369 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 MPV17P39210 176 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 NKX2-5P52952 324 aaPredicted RBP6.95□□□□□ -1.3
CMTM1-214ENST00000530141 UCP3P55916 312 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 KLF3P57682 345 aaPredicted RBP6.95□□□□□ -1.3
CMTM1-214ENST00000530141 HERV-K104P61576 105 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 DHODHQ02127 395 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 ZNF154Q13106 437 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 ZNF146Q15072 292 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 SLC22A25Q6T423 547 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 DHRS11Q6UWP2 260 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 NLRC3Q7RTR2 1065 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 FAM90A1Q86YD7 464 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 FAM185AQ8N0U4 392 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 ZNF808Q8N4W9 903 aaPredicted RBP6.95□□□□□ -1.3
CMTM1-214ENST00000530141 CCDC71LQ8N9Z2 235 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 SCCPDHQ8NBX0 429 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 UXS1Q8NBZ7 420 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 NUP37Q8NFH4 326 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 OR2T35Q8NGX2 323 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 GRPEL2Q8TAA5 225 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 MARCH1Q8TCQ1 289 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 ERGIC1Q969X5 290 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 PIK3IP1Q96FE7 263 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 NRIP2Q9BQI9 281 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 ZNF2Q9BSG1 426 aaPredicted RBP6.95□□□□□ -1.3
CMTM1-214ENST00000530141 PDCD10Q9BUL8 212 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 DPCDQ9BVM2 203 aaPredicted RBP6.95□□□□□ -1.3
CMTM1-214ENST00000530141 SEBOXQ9HB31 216 aaPredicted RBP6.95□□□□□ -1.3
CMTM1-214ENST00000530141 DECR2Q9NUI1 292 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 COMMD9Q9P000 198 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 Q9UFV3 132 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 POU2F3Q9UKI9 436 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 KCNIP3Q9Y2W7 256 aa6.95□□□□□ -1.3
CMTM1-214ENST00000530141 MED12LQ86YW9 2145 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 A6NLC8 198 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 TRDCB7Z8K6 153 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 NAPSAO96009 420 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 KNG1P01042 644 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 TK1P04183 234 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 GRPP07492 148 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 ZNF728P0DKX0 622 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 AKR1C4P17516 323 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 CXCL3P19876 107 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 CD40P25942 277 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 RBMXP38159 391 aaKnown RBP6.94□□□□□ -1.3
CMTM1-214ENST00000530141 NPY4RP50391 375 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 FABP6P51161 128 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 ERVS71-1P61550 626 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 ERVK11-1P61568 191 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 SRSF4Q08170 494 aaKnown RBP6.94□□□□□ -1.3
CMTM1-214ENST00000530141 PPP1R1AQ13522 171 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 SMIM21Q3B7S5 101 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 ABCA11PQ4W5N1 156 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 MEX3BQ6ZN04 569 aaKnown RBP6.94□□□□□ -1.3
CMTM1-214ENST00000530141 PRIMA1Q86XR5 153 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 SGPP2Q8IWX5 399 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 SLC38A6Q8IZM9 456 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 RPRMLQ8N4K4 120 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 ASCC1Q8N9N2 400 aaKnown RBP6.94□□□□□ -1.3
CMTM1-214ENST00000530141 SUMF2Q8NBJ7 301 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 OR52B4Q8NGK2 314 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 OR4A4PQ8NGN8 299 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 OR5M8Q8NGP6 311 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 LILRB1Q8NHL6 650 aaPredicted RBP6.94□□□□□ -1.3
CMTM1-214ENST00000530141 PPP1R35Q8TAP8 253 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 DIRC2Q96SL1 478 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 CHIAQ9BZP6 476 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 FN3KRPQ9HA64 309 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 Q9N2K0 584 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 RAB18Q9NP72 206 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 CRIM1Q9NZV1 1036 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 ZNF230Q9UIE0 474 aaPredicted RBP6.94□□□□□ -1.3
CMTM1-214ENST00000530141 MEMO1Q9Y316 297 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 ATP23Q9Y6H3 246 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 AKAP6Q13023 2319 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 DOCK7Q96N67 2140 aa6.94□□□□□ -1.3
CMTM1-214ENST00000530141 RTTNQ86VV8 2226 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 IGLV3-9A0A075B6K5 115 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 IFNL4K9M1U5 179 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 SDCBPO00560 298 aaPredicted RBP6.93□□□□□ -1.3
CMTM1-214ENST00000530141 CDIPTO14735 213 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 B3GALNT1O75752 331 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 IFNA21P01568 189 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 CFHR2P36980 270 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 CA7P43166 264 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 ASCL1P50553 236 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 NKX6-1P78426 367 aaPredicted RBP6.93□□□□□ -1.3
CMTM1-214ENST00000530141 SRPXP78539 464 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 FAM27E3Q08E93 113 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 PAN3Q58A45 887 aaKnown RBP6.93□□□□□ -1.3
CMTM1-214ENST00000530141 AADACL3Q5VUY0 350 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 ZNF880Q6PDB4 577 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 TRAT1Q6PIZ9 186 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 GSG1LQ6UXU4 331 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 RTN4RL2Q86UN3 420 aa6.93□□□□□ -1.3
CMTM1-214ENST00000530141 MAFIPQ8WZ33 124 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms