RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 P2RX3P56373 397 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 AESQ08117 197 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 GPR50Q13585 617 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 CCDC58Q4VC31 144 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 CXorf66Q5JRM2 361 aaPredicted RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SAPCD1Q5SSQ6 148 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 ASPHD1Q5U4P2 390 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 TEX38Q6PEX7 206 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 LHFPL2Q6ZUX7 228 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SLC25A26Q70HW3 274 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 FOXRED2Q8IWF2 684 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RP9Q8TA86 221 aaKnown RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF596Q8TC21 504 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SLC29A1Q99808 456 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 GNB4Q9HAV0 340 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RETNQ9HD89 108 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 FRRS1LQ9P0K9 344 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 KIAA1456Q9P272 454 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 ABCD2Q9UBJ2 740 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 IKZF2Q9UKS7 526 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 COPS3Q9UNS2 423 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SLC7A11Q9UPY5 501 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 UBE2J1Q9Y385 318 aaPredicted RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 DNAH17Q9UFH2 4485 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 DNAH6Q9C0G6 4158 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 DSCAML1Q8TD84 2053 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 LOC100506127A0A0U1RQW1 187 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 A0A1W2PPE3 182 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 A0A1W2PPI3 338 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 XKRY2A2RUG3 117 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 PRR23D1E9PI22 279 aaPredicted RBP2.74□□□□□ -1.97
PTPRC-213ENST00000529828 LY6LH3BQJ8 138 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 ARPC2O15144 300 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 SHOXO15266 292 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 IGLV3-1P01715 115 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 IGHG2P01859 326 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 TTRP02766 147 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 HSMCR30P0CW71 290 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 PRR23D2P0DMB1 279 aaPredicted RBP2.74□□□□□ -1.97
PTPRC-213ENST00000529828 GP9P14770 177 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 ALOX5APP20292 161 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 BCL3P20749 454 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 MPZP25189 248 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 SLC6A1P30531 599 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 CEACAM3P40198 252 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 PTGFRP43088 359 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 GPR12P47775 334 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 GNB1P62873 340 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF91Q05481 1191 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 SCN1BQ07699 218 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 IL24Q13007 206 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FHL3Q13643 280 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 KIR2DS1Q14954 304 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 KPNB1Q14974 876 aaKnown RBP2.74□□□□□ -1.97
PTPRC-213ENST00000529828 ATXN7L3Q14CW9 347 aaPredicted RBP2.74□□□□□ -1.97
PTPRC-213ENST00000529828 PNLIPRP3Q17RR3 467 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM27D1Q5T7N8 215 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 CYP2R1Q6VVX0 501 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 HEPN1Q6WQI6 88 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 RTN4RL2Q86UN3 420 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 CPOQ8IVL8 374 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 COMMD1Q8N668 190 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 RFT1Q96AA3 541 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 NSMCE2Q96MF7 247 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 NIPSNAP1Q9BPW8 284 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 HSPB9Q9BQS6 159 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 TM2D3Q9BRN9 247 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM192AQ9GZU8 254 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 ALX4Q9H161 411 aaPredicted RBP2.74□□□□□ -1.97
PTPRC-213ENST00000529828 GAL3ST2Q9H3Q3 398 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 EFCAB1Q9HAE3 211 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 SPAG4Q9NPE6 437 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 IL1RAPQ9NPH3 570 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 SLC35D1Q9NTN3 355 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 NKX1-2Q9UD57 310 aaPredicted RBP2.74□□□□□ -1.97
PTPRC-213ENST00000529828 BAIAP2Q9UQB8 552 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 GSTK1Q9Y2Q3 226 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 KIAA2026Q5HYC2 2103 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 A0A1B0GTI1 187 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 A0A1B0GVG6 124 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A18PA6NE21 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A16PA6NEW6 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A20PA6NIJ5 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A9PA6NNJ1 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A12PA8MX19 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A5PA8MXJ8 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 LOC110117498-PIK3R3F6TDL0 507 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 AP4M1O00189 453 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 DLGAP1O14490 977 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 HSPB6O14558 160 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 MGST3O14880 152 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FGF16O43320 207 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 ENTPD6O75354 484 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 OR2H2O95918 312 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A15PP0C7V4 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A13PP0C7W8 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A14PP0C7W9 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 FAM90A24PP0C7X0 464 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 IGHV4-30-4P0DP06 118 aa2.74□□□□□ -1.97
PTPRC-213ENST00000529828 GLP1RP43220 463 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms