RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 BARHL1Q9BZE3 327 aa8.9□□□□□ -0.98
AMBRA1-207ENST00000529553 ALX4Q9H161 411 aaPredicted RBP8.9□□□□□ -0.98
AMBRA1-207ENST00000529553 ZCCHC4Q9H5U6 513 aa8.9□□□□□ -0.98
AMBRA1-207ENST00000529553 IKZF2Q9UKS7 526 aa8.9□□□□□ -0.98
AMBRA1-207ENST00000529553 GTF2A1LQ9UNN4 478 aa8.9□□□□□ -0.98
AMBRA1-207ENST00000529553 WSB1Q9Y6I7 421 aa8.9□□□□□ -0.98
AMBRA1-207ENST00000529553 CEPT1Q9Y6K0 416 aa8.9□□□□□ -0.98
AMBRA1-207ENST00000529553 TRAV41A0A0B4J266 112 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 PRR32B1ATL7 298 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 G3V318 75 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 H3BN98 237 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 SLC33A1O00400 549 aaPredicted RBP8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 DEGS1O15121 323 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 TXNL1O43396 289 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 REG1BP48304 166 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 GNG10P50151 68 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 SNU13P55769 128 aaKnown RBP8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 MTCP1P56278 107 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 PAX5Q02548 391 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 SCN1BQ07699 218 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 RAB40BQ12829 278 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 APOFQ13790 326 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 IQCF1Q8N6M8 205 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 OR13A1Q8NGR1 328 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 PP6455Q8WZ26 134 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 TMEM106AQ96A25 262 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 THAP7Q9BT49 309 aaPredicted RBP8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 PPIL3Q9H2H8 161 aaKnown RBP8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 RETNQ9HD89 108 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 ERGIC3Q9Y282 383 aa8.89□□□□□ -0.99
AMBRA1-207ENST00000529553 MEIKINA0A087WXM9 373 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 SHISA3A0PJX4 238 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 NUPR2A6NF83 97 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 SYT7O43581 403 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 RGS11O94810 467 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 KDM4BO94953 1096 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 FSTP19883 344 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 PRKACBP22694 351 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 IL3RAP26951 378 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 GLP1RP43220 463 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 GINS1Q14691 196 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 ATXN7L3Q14CW9 347 aaPredicted RBP8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 KIAA2026Q5HYC2 2103 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 ZNF322Q6U7Q0 402 aaPredicted RBP8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 BBS1Q8NFJ9 593 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 OR52M1Q8NGK5 317 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 RFESDQ8TAC1 157 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 MBOAT4Q96T53 435 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 APOL4Q9BPW4 351 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 FAM110AQ9BQ89 295 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 MED4Q9NPJ6 270 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 ING3Q9NXR8 418 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 FAM53CQ9NYF3 392 aa8.88□□□□□ -0.99
AMBRA1-207ENST00000529553 CNIH1O95406 144 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 HLA-DRB1P01911 266 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 HSD17B1P14061 328 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 GZMHP20718 246 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 MAGEA2P43356 314 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 GK3PQ14409 553 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 Q3ZCU0 254 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 HAPLN4Q86UW8 402 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 SAXO1Q8IYX7 474 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 RDH10Q8IZV5 341 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 TCTEX1D1Q8N7M0 179 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 NIPSNAP1Q9BPW8 284 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 RSRP1Q9BUV0 290 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 ADI1Q9BV57 179 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 SLC25A19Q9HC21 320 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 KIF25Q9UIL4 384 aa8.87□□□□□ -0.99
AMBRA1-207ENST00000529553 IGKV1-12A0A0C4DH73 117 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 A0A1W2PPE3 182 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 ZNF736B4DX44 427 aaPredicted RBP8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 ATP6V0E1O15342 81 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 CCDC22O60826 627 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 IGKV1D-12P01611 117 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 KCNJ3P48549 501 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 CRIP2P52943 208 aaPredicted RBP8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 CDK5Q00535 292 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 PPP1R8Q12972 351 aaKnown RBP8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 CDK5R1Q15078 307 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 LTC4SQ16873 150 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 C19orf54Q5BKX5 351 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 LCN12Q6JVE5 192 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 PYHIN1Q6K0P9 492 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 FAHD1Q6P587 224 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 CEMP1Q6PRD7 247 aaPredicted RBP8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 UTS2BQ765I0 119 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 SPSB1Q96BD6 273 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 RHOVQ96L33 236 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 TEX12Q9BXU0 123 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 REEP1Q9H902 201 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 SIGLEC8Q9NYZ4 499 aa8.86□□□□□ -0.99
AMBRA1-207ENST00000529553 TNCP24821 2201 aa8.85□□□□□ -0.99
AMBRA1-207ENST00000529553 IGHV7-81A0A0B4J1V7 117 aa8.85□□□□□ -0.99
AMBRA1-207ENST00000529553 IGKV1-9A0A0C4DH69 117 aa8.85□□□□□ -0.99
AMBRA1-207ENST00000529553 ARPC2O15144 300 aa8.85□□□□□ -0.99
AMBRA1-207ENST00000529553 BRI3O95415 125 aa8.85□□□□□ -0.99
AMBRA1-207ENST00000529553 MRPL3P09001 348 aaKnown RBP8.85□□□□□ -0.99
AMBRA1-207ENST00000529553 ATF1P18846 271 aa8.85□□□□□ -0.99
AMBRA1-207ENST00000529553 ZP3P21754 424 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms