RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 RPL23AP62750 156 aaKnown RBP12.41□□□□□ -0.42
CTSB-215ENST00000528965 EGFEM1PQ0D2K5 195 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 CDK5R1Q15078 307 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 C10orf99Q6UWK7 81 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 TMPRSS11AQ6ZMR5 421 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 SLC16A12Q6ZSM3 486 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 PARP16Q8N5Y8 322 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 COMMD1Q8N668 190 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 OR10A7Q8NGE5 316 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 OR5AK2Q8NH90 309 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 GPER1Q99527 375 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 DNAH3Q8TD57 4116 aa12.41□□□□□ -0.42
CTSB-215ENST00000528965 KIAA2026Q5HYC2 2103 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A18PA6NE21 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A16PA6NEW6 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A20PA6NIJ5 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A9PA6NNJ1 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 SERPINE3A8MV23 424 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A12PA8MX19 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A5PA8MXJ8 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A15PP0C7V4 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A13PP0C7W8 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A14PP0C7W9 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM90A24PP0C7X0 464 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 MYL12AP19105 171 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 RAB3AP20336 220 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 PAX5Q02548 391 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 RSU1Q15404 277 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 FOXRED2Q8IWF2 684 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 DRAM1Q8N682 238 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 PACRGLQ8N7B6 248 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 C5orf56Q8N8D9 126 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 OR13A1Q8NGR1 328 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 OR10X1Q8NGY0 326 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 CNIH3Q8TBE1 160 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 TNFAIP8L1Q8WVP5 186 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 NR1H4Q96RI1 486 aaPredicted RBP12.4□□□□□ -0.42
CTSB-215ENST00000528965 FAM192AQ9GZU8 254 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 LINC00574Q9H8X3 128 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 ZFP57Q9NU63 452 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 ERVK13-1Q9NX77 482 aa12.4□□□□□ -0.42
CTSB-215ENST00000528965 A0A1W2PPI3 338 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 ANKRD65E5RJM6 399 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 ZFPL1O95159 310 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 GABRB1P18505 474 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 GNG10P50151 68 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 CD69Q07108 199 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 UNQ9370/PRO34162Q6UXP9 181 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 OR2W3Q7Z3T1 314 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 RNF144BQ7Z419 303 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 SLC35E3Q7Z769 313 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 MRPL41Q8IXM3 137 aaKnown RBP12.39□□□□□ -0.43
CTSB-215ENST00000528965 OR52I1Q8NGK6 324 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 MRGPRDQ8TDS7 321 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
CTSB-215ENST00000528965 TRAV24A0A0B4J272 114 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 WI2-2373I1.2A0A1W2PRP0 233 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 NPIPB11E5RHQ5 1161 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 IGKV1D-33P01593 117 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 IGKV1-33P01594 117 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 CD2P06729 351 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 CGB3P0DN86 165 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 CGB7P0DN87 165 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 DCKP27707 260 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 HOXD3P31249 432 aaPredicted RBP12.38□□□□□ -0.43
CTSB-215ENST00000528965 MYCNOSP40205 109 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 THBS3P49746 956 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 KRTAP10-11P60412 298 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 LTC4SQ16873 150 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 RSBN1Q5VWQ0 802 aaPredicted RBP12.38□□□□□ -0.43
CTSB-215ENST00000528965 ETV3LQ6ZN32 361 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 ZNF329Q86UD4 541 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 SATL1Q86VE3 508 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 KLHL30-AS1Q8NEE0 82 aa12.38□□□□□ -0.43
CTSB-215ENST00000528965 ISG20L2Q9H9L3 353 aaKnown RBP12.38□□□□□ -0.43
CTSB-215ENST00000528965 GABRPO00591 440 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 HSD17B6O14756 317 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 IGHV3-7P01780 117 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 IL3RAP26951 378 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 SSTR5P35346 364 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 GP2P55259 537 aaKnown RBP12.37□□□□□ -0.43
CTSB-215ENST00000528965 SMN1Q16637 294 aaKnown RBP12.37□□□□□ -0.43
CTSB-215ENST00000528965 UTF1Q5T230 341 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
CTSB-215ENST00000528965 LEAP2Q969E1 77 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 NOL4LQ96MY1 436 aaPredicted RBP12.37□□□□□ -0.43
CTSB-215ENST00000528965 S100A13Q99584 98 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 PDCD1LG2Q9BQ51 273 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 DPCDQ9BVM2 203 aaPredicted RBP12.37□□□□□ -0.43
CTSB-215ENST00000528965 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
CTSB-215ENST00000528965 TMEM30CPA0ZSE6 113 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 IGHG2P01859 326 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 CSTBP04080 98 aaKnown RBP12.36□□□□□ -0.43
CTSB-215ENST00000528965 GAPDHP04406 335 aaKnown RBP12.36□□□□□ -0.43
CTSB-215ENST00000528965 PPP3R1P63098 170 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 ZNF816Q0VGE8 651 aaPredicted RBP12.36□□□□□ -0.43
CTSB-215ENST00000528965 HNF4GQ14541 408 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 PIGYQ3MUY2 71 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 C11orf87Q6NUJ2 197 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 C8orf86Q6ZUL3 223 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms