RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 ZNF554Q86TJ5 538 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 CMTM4Q8IZR5 234 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 C11orf42Q8N5U0 333 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 RAB3CQ96E17 227 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 SULT4A1Q9BR01 284 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 PECRQ9BY49 303 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 SLIRPQ9GZT3 109 aaKnown RBP11.85□□□□□ -0.51
UBXN1-209ENST00000528907 NXF2Q9GZY0 626 aaKnown RBP11.85□□□□□ -0.51
UBXN1-209ENST00000528907 SIRPDQ9H106 197 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 RIMS4Q9H426 269 aaPredicted RBP11.85□□□□□ -0.51
UBXN1-209ENST00000528907 LINC00574Q9H8X3 128 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 BATF3Q9NR55 127 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 PLEKHJ1Q9NW61 149 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 ETAA1Q9NY74 926 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 OPN4Q9UHM6 478 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 A3GALT2U3KPV4 340 aa11.85□□□□□ -0.51
UBXN1-209ENST00000528907 NSD1Q96L73 2696 aaPredicted RBP11.85□□□□□ -0.51
UBXN1-209ENST00000528907 TRGV10A0A0A0MS01 117 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 A0A1W2PQ09 198 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 SERPINE3A8MV23 424 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 HSPB6O14558 160 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 NAPSAO96009 420 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 APOA1P02647 267 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 HIST1H1DP16402 221 aaKnown RBP11.84□□□□□ -0.51
UBXN1-209ENST00000528907 EDDM3AQ14507 147 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 ZNF273Q14593 569 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 BRICD5Q6PL45 260 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 METAP1DQ6UB28 335 aaPredicted RBP11.84□□□□□ -0.51
UBXN1-209ENST00000528907 FAM185AQ8N0U4 392 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 ZNF565Q8N9K5 539 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 OR4M1Q8NGD0 313 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 UPRTQ96BW1 309 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 S100A16Q96FQ6 103 aaKnown RBP11.84□□□□□ -0.51
UBXN1-209ENST00000528907 ARHGAP5-AS1Q96IT6 56 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 WDFY2Q96P53 400 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 FAAP24Q9BTP7 215 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 C7orf69Q9H7B7 122 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
UBXN1-209ENST00000528907 KIF25Q9UIL4 384 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 KCNK7Q9Y2U2 307 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 AUP1Q9Y679 476 aa11.84□□□□□ -0.51
UBXN1-209ENST00000528907 ARHGAP32A7KAX9 2087 aa11.83□□□□□ -0.51
UBXN1-209ENST00000528907 hCG_1809904A0A1W2PP81 198 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 A0A1W2PPE2 198 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 A0A1W2PR64 198 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 A0A1W2PRV1 198 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 ZNF729A6NN14 1252 aaPredicted RBP11.83□□□□□ -0.52
UBXN1-209ENST00000528907 ORC5O43913 435 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 TPPPO94811 219 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 MELTFP08582 738 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 GSTP1P09211 210 aaKnown RBP11.83□□□□□ -0.52
UBXN1-209ENST00000528907 ZNF728P0DKX0 622 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 GZMHP20718 246 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 ZNF260Q3ZCT1 412 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 NKAPLQ5M9Q1 402 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 METTL11BQ5VVY1 283 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 FOXB2Q5VYV0 432 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 FAHD2BQ6P2I3 314 aaPredicted RBP11.83□□□□□ -0.52
UBXN1-209ENST00000528907 ZNF880Q6PDB4 577 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 TRAT1Q6PIZ9 186 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 Q8N7P7 452 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 TPRX1Q8N7U7 411 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 SAMD12Q8N8I0 201 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 OR10A7Q8NGE5 316 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 MRPL30Q8TCC3 161 aaKnown RBP11.83□□□□□ -0.52
UBXN1-209ENST00000528907 NEK7Q8TDX7 302 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 FAHD2AQ96GK7 314 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 ZNF714Q96N38 554 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 DIABLOQ9NR28 239 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 YAE1D1Q9NRH1 226 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 COMMD3Q9UBI1 195 aa11.83□□□□□ -0.52
UBXN1-209ENST00000528907 JMJD1CQ15652 2540 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 MEIKINA0A087WXM9 373 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 UBE2QL1A1L167 161 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 NPIPB11E5RHQ5 1161 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 XRCC3O43542 346 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 FSHBP01225 129 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 PRTN3P24158 256 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 MNDAP41218 407 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 ARF6P62330 175 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 SRSF7Q16629 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
UBXN1-209ENST00000528907 PNLIPRP3Q17RR3 467 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 DYRK2Q92630 601 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 PHF21AQ96BD5 680 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 METTL8Q9H825 291 aaKnown RBP11.82□□□□□ -0.52
UBXN1-209ENST00000528907 AK3Q9UIJ7 227 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 ABCA1O95477 2261 aa11.82□□□□□ -0.52
UBXN1-209ENST00000528907 KBTBD11-OT1A0A1B0GTJ5 212 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 TOX4O94842 621 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 AVPP01185 164 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 CCL3L1P16619 93 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 PITPNAQ00169 270 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 C17orf58Q2M2W7 97 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 TMEM30BQ3MIR4 351 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 C6orf183Q5T699 404 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 HEPN1Q6WQI6 88 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 C1orf229Q6ZS94 237 aaPredicted RBP11.81□□□□□ -0.52
UBXN1-209ENST00000528907 MOB1BQ7L9L4 216 aa11.81□□□□□ -0.52
UBXN1-209ENST00000528907 OR13A1Q8NGR1 328 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms