RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 FAM90A10PA6NDY2 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A18PA6NE21 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A16PA6NEW6 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A20PA6NIJ5 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A7PA6NKC0 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 VGLL3A8MV65 326 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A22PA8MWA6 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A12PA8MX19 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A5PA8MXJ8 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A23PA8MXZ1 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 ARL6IP5O75915 188 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 CRYBA1P05813 215 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A15PP0C7V4 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A13PP0C7W8 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A14PP0C7W9 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 FAM90A24PP0C7X0 464 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 OMGP23515 440 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 CD34P28906 385 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 DYNC1I2Q13409 638 aaKnown RBP13.63□□□□□ -0.23
HIF3A-211ENST00000528563 ATAD3CQ5T2N8 411 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 ABHD12Q8N2K0 398 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 C3orf56Q8N813 242 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 PIFOQ8TCI5 191 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 Q96M66 194 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 GFI1Q99684 422 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 SELENOIQ9C0D9 397 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 SLITRK2Q9H156 845 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 SPACA1Q9HBV2 294 aa13.63□□□□□ -0.23
HIF3A-211ENST00000528563 RCC2Q9P258 522 aaKnown RBP13.63□□□□□ -0.23
HIF3A-211ENST00000528563 A0A087X0M5 115 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 A0A1B0GX30 115 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 BTBD17A6NE02 478 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 NPIPB11E5RHQ5 1161 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 SLC22A1O15245 554 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 CRTAPO75718 401 aaPredicted RBP13.62□□□□□ -0.23
HIF3A-211ENST00000528563 NDUFA7O95182 113 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 UBBP0CG47 229 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 LRRC75BQ2VPJ9 315 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 MINOS1Q5TGZ0 78 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 UBE2UQ5VVX9 321 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 SIGIRRQ6IA17 410 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 CD200R1LQ6Q8B3 271 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 GDPGP1Q6ZNW5 385 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 RTN4RL2Q86UN3 420 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 SVOPQ8N4V2 548 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 MMP24Q9Y5R2 645 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 MINOS1-NBL1R4GNA1 71 aa13.62□□□□□ -0.23
HIF3A-211ENST00000528563 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 H3BUX3 64 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 IGLV1-47P01700 117 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 MT-ND4P03905 459 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 VSIG8P0DPA2 414 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 GZMHP20718 246 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 FUT3P21217 361 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 HTR2CP28335 458 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 QRFPP83859 136 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 SSX2Q16385 188 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 UTF1Q5T230 341 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 ZNF497Q6ZNH5 498 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 KIRREL1Q96J84 757 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 CST11Q9H112 138 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 NDUFB11Q9NX14 153 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 CALYQ9NYX4 217 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 FBN3Q75N90 2809 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 TRAV39A0A0B4J263 110 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 TMEM30CPA0ZSE6 113 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 MCRIP1C9JLW8 97 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 GLAP06280 429 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 MDKP21741 143 aaPredicted RBP13.61□□□□□ -0.23
HIF3A-211ENST00000528563 GLP1RP43220 463 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 OR10K2Q6IF99 312 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 RAB12Q6IQ22 244 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 OR4P4Q8NGL7 312 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 OR4F5Q8NH21 305 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 RFESDQ8TAC1 157 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 KCNG3Q8TAE7 436 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 MRGPRDQ8TDS7 321 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 FAM46BQ96A09 425 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 ZNF747Q9BV97 191 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 ZNF286AQ9HBT8 521 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 AK6Q9Y3D8 172 aaKnown RBP13.61□□□□□ -0.23
HIF3A-211ENST00000528563 PEX16Q9Y5Y5 336 aa13.61□□□□□ -0.23
HIF3A-211ENST00000528563 A0A1B0GUS0 222 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 TRDV1A0A1B0GX56 115 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 H3BUI4 141 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 IL1AP01583 271 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 CALRP27797 417 aaKnown RBP13.6□□□□□ -0.23
HIF3A-211ENST00000528563 HTR1DP28221 377 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 RAG2P55895 527 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 RBM39Q14498 530 aaKnown RBP13.6□□□□□ -0.23
HIF3A-211ENST00000528563 GAPTQ8N292 157 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 OR6M1Q8NGM8 313 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 DPM3Q9P2X0 92 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 ANK2Q01484 3957 aa13.6□□□□□ -0.23
HIF3A-211ENST00000528563 FAM172BPA6NC97 362 aa13.59□□□□□ -0.23
HIF3A-211ENST00000528563 TMEM14DPA8MWL7 114 aa13.59□□□□□ -0.23
HIF3A-211ENST00000528563 SLC17A2O00624 439 aa13.59□□□□□ -0.23
HIF3A-211ENST00000528563 BPNT1O95861 308 aa13.59□□□□□ -0.23
HIF3A-211ENST00000528563 MPIG6BO95866 241 aa13.59□□□□□ -0.23
HIF3A-211ENST00000528563 GALP22466 123 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms