RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 RAB12Q6IQ22 244 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 RTN4RL2Q86UN3 420 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 ABHD12Q8N2K0 398 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 OR6M1Q8NGM8 313 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 OR4F5Q8NH21 305 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 ZNF596Q8TC21 504 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 MRGPRDQ8TDS7 321 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 C17orf50Q8WW18 174 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 FCGR1BQ92637 280 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 NCOR1P1Q9H4R4 102 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 BEX1Q9HBH7 125 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 CALYQ9NYX4 217 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 LRRC42Q9Y546 428 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 PEX16Q9Y5Y5 336 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 KIAA2026Q5HYC2 2103 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 DSCAML1Q8TD84 2053 aa10.88□□□□□ -0.67
CAPN1-215ENST00000528396 FAM172BPA6NC97 362 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A10PA6NDY2 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A18PA6NE21 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A16PA6NEW6 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A20PA6NIJ5 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A8PA6NJQ4 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A7PA6NKC0 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A22PA8MWA6 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A12PA8MX19 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A5PA8MXJ8 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A23PA8MXZ1 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A15PP0C7V4 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A13PP0C7W8 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A14PP0C7W9 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FAM90A24PP0C7X0 464 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 MYL9P24844 172 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 HTR1DP28221 377 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 PSMD7P51665 324 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 ARHGDIBP52566 201 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 PRRX1P54821 245 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 FABP5Q01469 135 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 RAB11BQ15907 218 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 LY6EQ16553 131 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 AANATQ16613 207 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 NKAPLQ5M9Q1 402 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 C1orf100Q5SVJ3 147 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 MINOS1Q5TGZ0 78 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 RSBN1Q5VWQ0 802 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-215ENST00000528396 SLC35E4Q6ICL7 350 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 BRICD5Q6PL45 260 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 TMEM91Q6ZNR0 172 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 LHFPL4Q7Z7J7 247 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 SPARTQ8N0X7 666 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 TMEM104Q8NE00 496 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 OR13A1Q8NGR1 328 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 KCNG3Q8TAE7 436 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 PLPPR1Q8TBJ4 325 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 MALSU1Q96EH3 234 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 NEDD4LQ96PU5 975 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 RAB18Q9NP72 206 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 RAB9BQ9NP90 201 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 NDUFB11Q9NX14 153 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 ETAA1Q9NY74 926 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 ZNF581Q9P0T4 197 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 AK6Q9Y3D8 172 aaKnown RBP10.87□□□□□ -0.67
CAPN1-215ENST00000528396 MINOS1-NBL1R4GNA1 71 aa10.87□□□□□ -0.67
CAPN1-215ENST00000528396 A0A1B0GUS0 222 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 AIPO00170 330 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 F2RL2O00254 374 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 CCRL2O00421 344 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 PDCD5O14737 125 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 MMP23AO75900 390 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 BPNT1O95861 308 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 IL1AP01583 271 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 FUT3P21217 361 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 PAX6P26367 422 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 CEACAM3P40198 252 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 GP2P55259 537 aaKnown RBP10.86□□□□□ -0.67
CAPN1-215ENST00000528396 PAX5Q02548 391 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 LTC4SQ16873 150 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 ZNF773Q6PK81 442 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 CCDC107Q8WV48 283 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 CREB3L1Q96BA8 519 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 Q96M66 194 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 TMEM59Q9BXS4 323 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 MEGF9Q9H1U4 602 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 TRAPPC2LQ9UL33 140 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 HILPDAQ9Y5L2 63 aa10.86□□□□□ -0.67
CAPN1-215ENST00000528396 TRAV39A0A0B4J263 110 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 SLC22A1O15245 554 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 ARSBP15848 533 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 GZMHP20718 246 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 P2RY14Q15391 338 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 SSX1Q16384 188 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 C17orf58Q2M2W7 97 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 UBE2UQ5VVX9 321 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 LYPD6Q86Y78 171 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 RFESDQ8TAC1 157 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 TAF15Q92804 592 aaKnown RBP eCLIP10.85□□□□□ -0.67
CAPN1-215ENST00000528396 ARL11Q969Q4 196 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 URM1Q9BTM9 101 aaKnown RBP10.85□□□□□ -0.67
CAPN1-215ENST00000528396 IDI2-AS1Q9NZ38 188 aa10.85□□□□□ -0.67
CAPN1-215ENST00000528396 C1RLQ9NZP8 487 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms