RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 GPER1Q99527 375 aa12.3□□□□□ -0.44
CLNS1A-210ENST00000528364 BARHL1Q9BZE3 327 aa12.3□□□□□ -0.44
CLNS1A-210ENST00000528364 TAS2R4Q9NYW5 299 aa12.3□□□□□ -0.44
CLNS1A-210ENST00000528364 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.3□□□□□ -0.44
CLNS1A-210ENST00000528364 MOB4Q9Y3A3 225 aa12.3□□□□□ -0.44
CLNS1A-210ENST00000528364 HSPE1-MOB4S4R3N1 261 aa12.3□□□□□ -0.44
CLNS1A-210ENST00000528364 NPIPB11E5RHQ5 1161 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 M0QZK8 103 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 FADS2O95864 444 aaKnown RBP12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 IL1AP01583 271 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 LIMS3P0CW19 117 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 LIMS4P0CW20 117 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 RAB3AP20336 220 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 C21orf33P30042 268 aaPredicted RBP12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 SSTR5P35346 364 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 GBX2P52951 348 aaPredicted RBP12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 HES1Q14469 280 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 RSU1Q15404 277 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 ASCL4Q6XD76 172 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 MRPL41Q8IXM3 137 aaKnown RBP12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 LINC00482Q8N8I6 264 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 UBALD1Q8TB05 177 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 RCC1LQ96I51 464 aaKnown RBP12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 NCOR1P1Q9H4R4 102 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 LINC00574Q9H8X3 128 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 ING4Q9UNL4 249 aa12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 SIRT4Q9Y6E7 314 aaPredicted RBP12.29□□□□□ -0.44
CLNS1A-210ENST00000528364 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 CCDC159P0C7I6 412 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 TMEM11P17152 192 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 IL13RA2Q14627 380 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 SMN1Q16637 294 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 C11orf87Q6NUJ2 197 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 C5orf56Q8N8D9 126 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 SUMF2Q8NBJ7 301 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 Q8NFD4 153 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 APH1BQ8WW43 257 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 JAM3Q9BX67 310 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 FAM192AQ9GZU8 254 aa12.28□□□□□ -0.44
CLNS1A-210ENST00000528364 IGHV3-72A0A0B4J1Y9 119 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 LOC100130705A0A1B0GUX0 176 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 MAGEB3O15480 346 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 IGKV1D-33P01593 117 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 IGKV1-33P01594 117 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 REG1BP48304 166 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 RPL23AP62750 156 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 RAB40BQ12829 278 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 MADCAM1Q13477 382 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 HAVCR2Q8TDQ0 301 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 CCDC107Q8WV48 283 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 Q96MT0 163 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 DPCDQ9BVM2 203 aaPredicted RBP12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 MRPS18AQ9NVS2 196 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 FAM118AQ9NWS6 357 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 ST3GAL6Q9Y274 331 aa12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 AMMECR1Q9Y4X0 333 aaPredicted RBP12.27□□□□□ -0.45
CLNS1A-210ENST00000528364 NBEAL2Q6ZNJ1 2754 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 SERPINE3A8MV23 424 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 THBS3P49746 956 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 ETV1P50549 477 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 MRPL28Q13084 256 aaKnown RBP12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 OR2G6Q5TZ20 316 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 ZFP1Q6P2D0 407 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 C8orf86Q6ZUL3 223 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 OR2W3Q7Z3T1 314 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 MOB3BQ86TA1 216 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 OR10X1Q8NGY0 326 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 DUX3Q96PT4 197 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 PCDHB16Q9NRJ7 776 aa12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 RPL36Q9Y3U8 105 aaKnown RBP12.26□□□□□ -0.45
CLNS1A-210ENST00000528364 IGHV3-43A0A0B4J1X8 118 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 A0A1W2PP11 408 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 GEMIN2O14893 280 aaKnown RBP12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 MPZL2O60487 215 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 WBP4O75554 376 aaKnown RBP12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 OR7C1O76099 320 aaPredicted RBP12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 CLIC3O95833 236 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 IGHV3-43DP0DP04 118 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 RAB7AP51149 207 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 EGFEM1PQ0D2K5 195 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 KLHL22Q53GT1 634 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 VAX1Q5SQQ9 334 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 OR13C5Q8NGS8 318 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 OR52N1Q8NH53 320 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 GPR148Q8TDV2 347 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 CHPT1Q8WUD6 406 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 MYCBPQ99417 103 aaPredicted RBP12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 C9orf16Q9BUW7 83 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 METTL9Q9H1A3 318 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 FGF20Q9NP95 211 aaPredicted RBP12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 DNAH9Q9NYC9 4486 aa12.25□□□□□ -0.45
CLNS1A-210ENST00000528364 IGHV1-3A0A0C4DH29 117 aa12.24□□□□□ -0.45
CLNS1A-210ENST00000528364 NUDT19A8MXV4 375 aa12.24□□□□□ -0.45
CLNS1A-210ENST00000528364 C15orf65H3BRN8 121 aa12.24□□□□□ -0.45
CLNS1A-210ENST00000528364 HSD17B6O14756 317 aa12.24□□□□□ -0.45
CLNS1A-210ENST00000528364 DUS4LO95620 317 aaKnown RBP12.24□□□□□ -0.45
CLNS1A-210ENST00000528364 SERPINA2P20848 420 aa12.24□□□□□ -0.45
CLNS1A-210ENST00000528364 KCNJ3P48549 501 aa12.24□□□□□ -0.45
CLNS1A-210ENST00000528364 RBM11P57052 281 aaKnown RBP12.24□□□□□ -0.45
CLNS1A-210ENST00000528364 PAX5Q02548 391 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms