RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 FBLIM1Q8WUP2 373 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 RGP1Q92546 391 aaPredicted RBP7.75□□□□□ -1.17
CHD7-208ENST00000528280 CNBD2Q96M20 576 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 LINC00574Q9H8X3 128 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 PTTG2Q9NZH5 202 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 GHRLQ9UBU3 117 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 AMMECR1Q9Y4X0 333 aaPredicted RBP7.75□□□□□ -1.17
CHD7-208ENST00000528280 HILPDAQ9Y5L2 63 aa7.75□□□□□ -1.17
CHD7-208ENST00000528280 SIRT4Q9Y6E7 314 aaPredicted RBP7.75□□□□□ -1.17
CHD7-208ENST00000528280 WNK1Q9H4A3 2382 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 A0A087WXM4 84 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 TRAV24A0A0B4J272 114 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 MEX3AA1L020 520 aaKnown RBP7.74□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A22PA8MWA6 464 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 BUB1B-PAK6H3BSN5 160 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 M0QZK8 103 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 IGLV1-47P01700 117 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 TFAP2AP05549 437 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 GLAP06280 429 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 FAM106CPP0CH98 169 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 CGB3P0DN86 165 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 CGB7P0DN87 165 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 CELP19835 753 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 FSTP19883 344 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 RAB13P51153 203 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 SRSF4Q08170 494 aaKnown RBP7.74□□□□□ -1.17
CHD7-208ENST00000528280 GPR50Q13585 617 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 CNPY1Q3B7I2 92 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 FOXB2Q5VYV0 432 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 XAF1Q6GPH4 301 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 RNF144BQ7Z419 303 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 Q8N2B8 174 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 TSPAN14Q8NG11 270 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 COQ2Q96H96 371 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 NKX3-1Q99801 234 aaPredicted RBP7.74□□□□□ -1.17
CHD7-208ENST00000528280 DPCDQ9BVM2 203 aaPredicted RBP7.74□□□□□ -1.17
CHD7-208ENST00000528280 MND1Q9BWT6 205 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 LIN7BQ9HAP6 207 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 IDI2-AS1Q9NZ38 188 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 TPRKBQ9Y3C4 175 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 DSCAML1Q8TD84 2053 aa7.74□□□□□ -1.17
CHD7-208ENST00000528280 TRBV5-7A0A0A0MS05 114 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 TMEM30CPA0ZSE6 113 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A10PA6NDY2 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A18PA6NE21 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A16PA6NEW6 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A20PA6NIJ5 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A7PA6NKC0 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A12PA8MX19 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A5PA8MXJ8 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A23PA8MXZ1 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 MCRIP1C9JLW8 97 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 NPIPB11E5RHQ5 1161 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 XPNPEP2O43895 674 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 CA11O75493 328 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 MMP23AO75900 390 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 OR7C1O76099 320 aaPredicted RBP7.73□□□□□ -1.17
CHD7-208ENST00000528280 CDRT1O95170 752 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 LALBAP00709 142 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 GNAO1P09471 354 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 CSF1P09603 554 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A15PP0C7V4 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A13PP0C7W8 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A14PP0C7W9 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FAM90A24PP0C7X0 464 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 NFYBP25208 207 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 OR3A4PP47883 348 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 ALDH3B2P48448 385 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 RBM11P57052 281 aaKnown RBP7.73□□□□□ -1.17
CHD7-208ENST00000528280 KRTAP10-3P60369 221 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 RPS11P62280 158 aaKnown RBP eCLIP7.73□□□□□ -1.17
CHD7-208ENST00000528280 ATXN7L3Q14CW9 347 aaPredicted RBP7.73□□□□□ -1.17
CHD7-208ENST00000528280 C17orf58Q2M2W7 97 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 HLA-DRB5Q30154 266 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 SLC22A6Q4U2R8 563 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 PLA1AQ53H76 456 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 ARSJQ5FYB0 599 aaPredicted RBP7.73□□□□□ -1.17
CHD7-208ENST00000528280 C6orf141Q5SZD1 244 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 PRAMEF5Q5TYX0 476 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 AHSA2Q719I0 299 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 THNSL2Q86YJ6 484 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 DYNAPQ8N1N2 210 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 JAGN1Q8N5M9 183 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 NKAIN3Q8N8D7 197 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 SUMF2Q8NBJ7 301 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 OR52M1Q8NGK5 317 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 OR4P4Q8NGL7 312 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 PGLYRP3Q96LB9 341 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 UQCC2Q9BRT2 126 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 FKBP14Q9NWM8 211 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 ING3Q9NXR8 418 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 CALYQ9NYX4 217 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 KIF25Q9UIL4 384 aa7.73□□□□□ -1.17
CHD7-208ENST00000528280 PTGES3LE9PB15 166 aa7.72□□□□□ -1.17
CHD7-208ENST00000528280 LY6LH3BQJ8 138 aa7.72□□□□□ -1.17
CHD7-208ENST00000528280 J3QR06 171 aa7.72□□□□□ -1.17
CHD7-208ENST00000528280 HSPB6O14558 160 aa7.72□□□□□ -1.17
CHD7-208ENST00000528280 GEMIN2O14893 280 aaKnown RBP7.72□□□□□ -1.17
CHD7-208ENST00000528280 ORC5O43913 435 aa7.72□□□□□ -1.17
CHD7-208ENST00000528280 IL1AP01583 271 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms