RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 HLA-DRB5Q30154 266 aa26.59■■□□□ 1.85
SSSCA1-205ENST00000527920 SLC22A6Q4U2R8 563 aa26.59■■□□□ 1.85
SSSCA1-205ENST00000527920 NKAIN3Q8N8D7 197 aa26.59■■□□□ 1.85
SSSCA1-205ENST00000527920 MRPS28Q9Y2Q9 187 aaKnown RBP26.59■■□□□ 1.85
SSSCA1-205ENST00000527920 WNK1Q9H4A3 2382 aa26.59■■□□□ 1.85
SSSCA1-205ENST00000527920 LEUTXA8MZ59 168 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 NPIPB11E5RHQ5 1161 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 GEMIN2O14893 280 aaKnown RBP26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 PIN1P1O15428 100 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 CEACAM3P40198 252 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 ARHGDIBP52566 201 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 PRRX1P54821 245 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 LYPD6Q86Y78 171 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 JAGN1Q8N5M9 183 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 MS4A15Q8N5U1 240 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 OR10A7Q8NGE5 316 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 VCX3BQ9H321 246 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 LSM2Q9Y333 95 aaKnown RBP26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 SIGLEC9Q9Y336 463 aa26.58■■□□□ 1.85
SSSCA1-205ENST00000527920 A0A1W2PPK0 400 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 PTGES3LE9PB15 166 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 H3BUI4 141 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 TOR1AO14656 332 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 SLC35A2P78381 396 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 TMEM219Q86XT9 240 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 MUL1Q969V5 352 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 ANKRD60Q9BZ19 345 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 ZNF702PQ9H963 129 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 SPACA1Q9HBV2 294 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 ZNF581Q9P0T4 197 aa26.57■■□□□ 1.84
SSSCA1-205ENST00000527920 OOSP1A8MZH6 123 aa26.56■■□□□ 1.84
SSSCA1-205ENST00000527920 MYF6P23409 242 aa26.56■■□□□ 1.84
SSSCA1-205ENST00000527920 SPHARQ15513 63 aa26.56■■□□□ 1.84
SSSCA1-205ENST00000527920 OR9G1Q8NH87 305 aa26.56■■□□□ 1.84
SSSCA1-205ENST00000527920 UQCC2Q9BRT2 126 aa26.56■■□□□ 1.84
SSSCA1-205ENST00000527920 IDI2-AS1Q9NZ38 188 aa26.56■■□□□ 1.84
SSSCA1-205ENST00000527920 A0A1W2PP11 408 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM172BPA6NC97 362 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 BUB1B-PAK6H3BSN5 160 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 MAS1P04201 325 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 JUNBP17275 347 aaPredicted RBP26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 BRS3P32247 399 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 IRF3Q14653 427 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 HERPUD1Q15011 391 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 GLIPR1L1Q6UWM5 242 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 SLC16A12Q6ZSM3 486 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 C16orf82Q7Z2V1 217 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 MMP27Q9H306 513 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 TPRKBQ9Y3C4 175 aa26.55■■□□□ 1.84
SSSCA1-205ENST00000527920 TMEM30CPA0ZSE6 113 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 H0YHG0 523 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 LY6LH3BQJ8 138 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 NFYBP25208 207 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 GPR50Q13585 617 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 AWAT2Q6E213 333 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 UNQ9370/PRO34162Q6UXP9 181 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 MRGPRDQ8TDS7 321 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 MMP28Q9H239 520 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 DUSP21Q9H596 190 aa26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 RCC2Q9P258 522 aaKnown RBP26.54■■□□□ 1.84
SSSCA1-205ENST00000527920 GZMHP20718 246 aa26.53■■□□□ 1.84
SSSCA1-205ENST00000527920 TPTE2P1Q5T6R2 138 aa26.53■■□□□ 1.84
SSSCA1-205ENST00000527920 CCDC144NLQ6NUI1 221 aa26.53■■□□□ 1.84
SSSCA1-205ENST00000527920 Q6ZTK2 550 aa26.53■■□□□ 1.84
SSSCA1-205ENST00000527920 KLHDC1Q8N7A1 406 aa26.53■■□□□ 1.84
SSSCA1-205ENST00000527920 CFHR4Q92496 578 aa26.53■■□□□ 1.84
SSSCA1-205ENST00000527920 OR5M11Q96RB7 305 aa26.53■■□□□ 1.84
SSSCA1-205ENST00000527920 PRSS22Q9GZN4 317 aa26.53■■□□□ 1.84
SSSCA1-205ENST00000527920 AMMECR1Q9Y4X0 333 aaPredicted RBP26.53■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A10PA6NDY2 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A18PA6NE21 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A16PA6NEW6 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A20PA6NIJ5 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A7PA6NKC0 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A12PA8MX19 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A5PA8MXJ8 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A23PA8MXZ1 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A15PP0C7V4 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A13PP0C7W8 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A14PP0C7W9 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 FAM90A24PP0C7X0 464 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 ACSM3Q53FZ2 586 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 PHYHIPQ92561 330 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 GHRLQ9UBU3 117 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 VWFP04275 2813 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 MEGF8Q7Z7M0 2845 aa26.52■■□□□ 1.84
SSSCA1-205ENST00000527920 HSPA13P48723 471 aa26.51■■□□□ 1.83
SSSCA1-205ENST00000527920 C2orf68Q2NKX9 166 aa26.51■■□□□ 1.83
SSSCA1-205ENST00000527920 UTF1Q5T230 341 aa26.51■■□□□ 1.83
SSSCA1-205ENST00000527920 ATAD3CQ5T2N8 411 aa26.51■■□□□ 1.83
SSSCA1-205ENST00000527920 ZNF497Q6ZNH5 498 aa26.51■■□□□ 1.83
SSSCA1-205ENST00000527920 SGCDQ92629 289 aa26.51■■□□□ 1.83
SSSCA1-205ENST00000527920 LIN7BQ9HAP6 207 aa26.51■■□□□ 1.83
SSSCA1-205ENST00000527920 SERTAD4Q9NUC0 356 aa26.51■■□□□ 1.83
SSSCA1-205ENST00000527920 J3QR06 171 aa26.5■■□□□ 1.83
SSSCA1-205ENST00000527920 SSTR5P35346 364 aa26.5■■□□□ 1.83
SSSCA1-205ENST00000527920 AKR1E2Q96JD6 320 aa26.5■■□□□ 1.83
SSSCA1-205ENST00000527920 SC5DO75845 299 aa26.49■■□□□ 1.83
SSSCA1-205ENST00000527920 RBM39Q14498 530 aaKnown RBP26.49■■□□□ 1.83
SSSCA1-205ENST00000527920 MED22Q15528 200 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms