RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 DOLPP1Q86YN1 238 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 ZNF584Q8IVC4 421 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 SLC38A6Q8IZM9 456 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 C17orf78Q8N4C9 275 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 PARP16Q8N5Y8 322 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 TMEM185AQ8NFB2 350 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 OR1M1Q8NGA1 313 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 OR4M1Q8NGD0 313 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 OR52B4Q8NGK2 314 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 OR13C9Q8NGT0 318 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 TRMT10AQ8TBZ6 339 aaKnown RBP3.55□□□□□ -1.84
CD44-226ENST00000527889 NPRL2Q8WTW4 380 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 AP3S1Q92572 193 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 BORCS5Q969J3 196 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 MRGPRFQ96AM1 343 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 RNF183Q96D59 192 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 REEP6Q96HR9 211 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 SDHCQ99643 169 aaPredicted RBP3.55□□□□□ -1.84
CD44-226ENST00000527889 HINT2Q9BX68 163 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 C1QTNF6Q9BXI9 259 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 PRORYQ9H606 182 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 RANBP3Q9H6Z4 567 aaPredicted RBP3.55□□□□□ -1.84
CD44-226ENST00000527889 MOB1AQ9H8S9 216 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 ZFP57Q9NU63 452 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 PTTG3PQ9NZH4 202 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 NDRG3Q9UGV2 375 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 PIGLQ9Y2B2 252 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 V9GY05 133 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 V9GYH0 126 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 CCDC168Q8NDH2 2452 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 PKD1L1Q8TDX9 2849 aa3.55□□□□□ -1.84
CD44-226ENST00000527889 TRAV25A0A0B4J276 109 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 TMEM272A0A1B0GTI8 110 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 A0A1B0GUH1 482 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 A0A1B0GVG6 124 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 SMCO3A2RU48 225 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 IFITM5A6NNB3 132 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 EEF1E1-BLOC1S5C9J1V9 151 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 AIPO00170 330 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 SLC17A2O00624 439 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 ST8SIA3O43173 380 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 EEF1E1O43324 174 aaKnown RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 SLC19A2O60779 497 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 CCNKO75909 580 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 DHRS3O75911 302 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 KDM4BO94953 1096 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 UBL3O95164 117 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 PLAUP00749 431 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 NGFP01138 241 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 CGAP01215 116 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 IGLV3-1P01715 115 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 RAF1P04049 648 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 HKR1P10072 659 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 RAB3AP20336 220 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 DTYMKP23919 212 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 ACKR3P25106 362 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 STOMP27105 288 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 BDKRB2P30411 391 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 CEACAM8P31997 349 aaPredicted RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 PTGER4P35408 488 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 APLNRP35414 380 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 TIMP3P35625 211 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 ARR3P36575 388 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 RBMXP38159 391 aaKnown RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 DDOSTP39656 456 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 ETV6P41212 452 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 GPR12P47775 334 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 EVX1P49640 407 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 IDH3GP51553 393 aaPredicted RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 UBE2NP61088 152 aaKnown RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 ADORA2A-AS1P86434 159 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 TGFBR3Q03167 851 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 ZNF92Q03936 586 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 MZT1Q08AG7 82 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 TNK1Q13470 666 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 GABRA6Q16445 453 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 GSG1Q2KHT4 349 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 C2orf68Q2NKX9 166 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 PYDC2Q56P42 97 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 UBE2NLQ5JXB2 153 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 GLT8D1Q68CQ7 371 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 DHRS7BQ6IAN0 325 aaPredicted RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 TMEM211Q6ICI0 200 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 FAM131AQ6UXB0 335 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 LINC00299Q6ZSB3 139 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 Q6ZT83 130 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 DPPA2Q7Z7J5 298 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 CENPVQ7Z7K6 275 aaPredicted RBP3.54□□□□□ -1.84
CD44-226ENST00000527889 CROCCP3Q8IVE0 287 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 ZNF101Q8IZC7 436 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 OR5AS1Q8N127 324 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 GABRG1Q8N1C3 465 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 JAGN1Q8N5M9 183 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 WDR31Q8NA23 367 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 TMEM104Q8NE00 496 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 SLC30A7Q8NEW0 376 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 OR56B1Q8NGI3 324 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 OR4D6Q8NGJ1 314 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 OR52H1Q8NGJ2 320 aa3.54□□□□□ -1.84
CD44-226ENST00000527889 RNASE8Q8TDE3 154 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms