RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 FAM90A12PA8MX19 464 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 FAM90A5PA8MXJ8 464 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 E9PQ18 207 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 H3BNX3 289 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 GABRPO00591 440 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 IL1AP01583 271 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 CD2P06729 351 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 FAM90A15PP0C7V4 464 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 FAM90A13PP0C7W8 464 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 FAM90A14PP0C7W9 464 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 FAM90A24PP0C7X0 464 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 GTF2A1P52655 376 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 IL13RA2Q14627 380 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 PIGYQ3MUY2 71 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 KLHL22Q53GT1 634 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 OR51D1Q8NGF3 324 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 OR51A2Q8NGJ7 313 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 OR52I1Q8NGK6 324 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 SERPINE3A8MV23 424 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 K7EIL1 84 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 KCNJ3P48549 501 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 RAB7AP51149 207 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 DIAPH2-AS1Q14236 149 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 RSBN1Q5VWQ0 802 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 C10orf67Q8IYJ2 551 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 PLPPR1Q8TBJ4 325 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 CHPT1Q8WUD6 406 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 DPF1Q92782 380 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 NOL4LQ96MY1 436 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 S100A13Q99584 98 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 C9orf16Q9BUW7 83 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 TAS2R4Q9NYW5 299 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 ST3GAL6Q9Y274 331 aa17.75■□□□□ 0.43
TRAPPC4-208ENST00000527680 LOC100130705A0A1B0GUX0 176 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 A0A1W2PPE3 182 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 NUDT19A8MXV4 375 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 NPIPB11E5RHQ5 1161 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 CDRT1O95170 752 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 IGKV1D-33P01593 117 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 IGKV1-33P01594 117 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 CSTBP04080 98 aaKnown RBP17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 HOXD3P31249 432 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 MOB3BQ86TA1 216 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 OR8H3Q8N146 312 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 SUMF2Q8NBJ7 301 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 GPR148Q8TDV2 347 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 DPCDQ9BVM2 203 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 JAM3Q9BX67 310 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 METTL9Q9H1A3 318 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 LINC00527Q9UJ94 153 aa17.74■□□□□ 0.43
TRAPPC4-208ENST00000527680 A0A1W2PPI3 338 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 OR7C1O76099 320 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 GZMHP20718 246 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 SSTR5P35346 364 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 KRTAP10-11P60412 298 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 SLC35B1P78383 322 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 SLC16A12Q6ZSM3 486 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 C5orf56Q8N8D9 126 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 OR10A7Q8NGE5 316 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 SLC29A1Q99808 456 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 GPR61Q9BZJ8 451 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 LINC00574Q9H8X3 128 aa17.73■□□□□ 0.43
TRAPPC4-208ENST00000527680 WI2-2373I1.2A0A1W2PRP0 233 aa17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 NCBP2LA6PVI3 153 aaKnown RBP17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 RPL23AP62750 156 aaKnown RBP17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 PPP3R1P63098 170 aa17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 VAX1Q5SQQ9 334 aa17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 ATAD3CQ5T2N8 411 aa17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 ZNF529Q6P280 563 aa17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 RPL22L1Q6P5R6 122 aaKnown RBP17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 SLC35E3Q7Z769 313 aa17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 MRPL41Q8IXM3 137 aaKnown RBP17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 LINC00482Q8N8I6 264 aa17.72■□□□□ 0.43
TRAPPC4-208ENST00000527680 FGF16O43320 207 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 GAPDHP04406 335 aaKnown RBP17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 ZNF93P35789 620 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 ASCL4Q6XD76 172 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 FOXRED2Q8IWF2 684 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 Q8NFD4 153 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 OR52N1Q8NH53 320 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 NEK7Q8TDX7 302 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 CCDC107Q8WV48 283 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 TMEM106AQ96A25 262 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 TMEM138Q9NPI0 162 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 ZFP57Q9NU63 452 aa17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 MRPS18AQ9NVS2 196 aaKnown RBP17.71■□□□□ 0.43
TRAPPC4-208ENST00000527680 TMEM30CPA0ZSE6 113 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 CCRL2O00421 344 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 HSD17B6O14756 317 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 LIMS3P0CW19 117 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 LIMS4P0CW20 117 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 SERPINA2P20848 420 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 REG1BP48304 166 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 THBS3P49746 956 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 CCDC58Q4VC31 144 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 DDI2Q5TDH0 399 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 TMPRSS11AQ6ZMR5 421 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 C8orf86Q6ZUL3 223 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 OR2W3Q7Z3T1 314 aa17.7■□□□□ 0.42
TRAPPC4-208ENST00000527680 RGP1Q92546 391 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms