RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 FAM46BQ96A09 425 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 MRPL24Q96A35 216 aaKnown RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 GMPPAQ96IJ6 420 aaPredicted RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 UHRF2Q96PU4 802 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 MCHR1Q99705 422 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 EFCAB11Q9BUY7 163 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 NUDT9Q9BW91 350 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 C5orf66Q9H5L9 145 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 PATZ1Q9HBE1 687 aaKnown RBP5.04□□□□□ -1.6
CD44-225ENST00000527326 PDFQ9HBH1 243 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 SLC7A10Q9NS82 523 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 CENPMQ9NSP4 180 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 OBP2AQ9NY56 170 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 EHFQ9NZC4 300 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 TAAR2Q9P1P5 351 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 DUSP13Q9UII6 198 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 SERTAD3Q9UJW9 196 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 JPT1Q9UK76 154 aa5.04□□□□□ -1.6
CD44-225ENST00000527326 PIKFYVEQ9Y2I7 2098 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 NUP210LQ5VU65 1888 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 TRAV9-2A0A087WT02 112 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 A0A1B0GW15 77 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 IGLON5A6NGN9 336 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 OR2T8A6NH00 312 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 NPIPB15A6NHN6 443 aaPredicted RBP5.03□□□□□ -1.6
CD44-225ENST00000527326 SLC17A3O00476 420 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 HS3ST1O14792 307 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 PDE6DO43924 150 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 GJB3O75712 270 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 THBDP07204 575 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 DBHP09172 617 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 CRISP2P16562 243 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 OMGP23515 440 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 ATP6V0CP27449 155 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 GCH1P30793 250 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 CORO1AP31146 461 aaKnown RBP5.03□□□□□ -1.6
CD44-225ENST00000527326 GRK6P43250 576 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 DUSP3P51452 185 aaPredicted RBP5.03□□□□□ -1.6
CD44-225ENST00000527326 KRTDAPP60985 99 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 RHOBP62745 196 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 FKBP1AP62942 108 aaKnown RBP5.03□□□□□ -1.6
CD44-225ENST00000527326 HERV-K104P63124 156 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 SUPT4H1P63272 117 aaKnown RBP5.03□□□□□ -1.6
CD44-225ENST00000527326 AESQ08117 197 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 SMAGPQ0VAQ4 97 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 ADIPOQQ15848 244 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 ACKR1Q16570 336 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 GAB4Q2WGN9 574 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 HLA-BQ31612 363 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 CD300EQ496F6 205 aaPredicted RBP5.03□□□□□ -1.6
CD44-225ENST00000527326 COX19Q49B96 90 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 SPIN3Q5JUX0 258 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 STUMQ69YW2 141 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 MRGPRGQ86SM5 289 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 FAM58AQ8N1B3 248 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 RFLNBQ8N5W9 214 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 ZNF676Q8N7Q3 588 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 ZFP62Q8NB50 900 aaPredicted RBP5.03□□□□□ -1.6
CD44-225ENST00000527326 NECAP1Q8NC96 275 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 OR4F17Q8NGA8 305 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 OR10P1Q8NGE3 313 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 OR2AE1Q8NHA4 323 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 UBE2E3Q969T4 207 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 WBP2Q969T9 261 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 SARAFQ96BY9 339 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 WDR34Q96EX3 536 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 RAX2Q96IS3 184 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 OR4F4Q96R69 305 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 KXD1Q9BQD3 176 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 SPATA25Q9BR10 227 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 RTBDNQ9BSG5 229 aaPredicted RBP5.03□□□□□ -1.6
CD44-225ENST00000527326 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 TTTY10Q9BZA0 68 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 DMRT3Q9NQL9 472 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 SPANXA1Q9NS26 97 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 TMEM30AQ9NV96 361 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 PRR13Q9NZ81 148 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 CKLFQ9UBR5 152 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 TBC1D29Q9UFV1 150 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 CRLS1Q9UJA2 301 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 FBXL7Q9UJT9 491 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 VDAC3Q9Y277 283 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 B3GALT5Q9Y2C3 310 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 RFNGQ9Y644 331 aa5.03□□□□□ -1.6
CD44-225ENST00000527326 NUP214P35658 2090 aaPredicted RBP5.02□□□□□ -1.61
CD44-225ENST00000527326 NINQ8N4C6 2090 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 MYO10Q9HD67 2058 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 A0A1W2PPV4 95 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 A0A1W2PR80 420 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 IGSF23A1L1A6 192 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 PSMB11A5LHX3 300 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 TMEM189A5PLL7 270 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 DPRXA6NFQ7 191 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 ANKRD66B4E2M5 251 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 TMEM250H0YL14 139 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 K7EP34 96 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 ZNF207O43670 478 aaKnown RBP5.02□□□□□ -1.61
CD44-225ENST00000527326 NUPR1O60356 82 aa5.02□□□□□ -1.61
CD44-225ENST00000527326 UPK3AO75631 287 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms