RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 IL36GQ9NZH8 169 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 OR6C3Q9NZP0 311 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 ST3GAL6Q9Y274 331 aa8.34□□□□□ -1.07
PRPF40B-204ENST00000527253 PNMA8CA0A1B0GUJ8 204 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 G3V4G9 280 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 TOR1AO14656 332 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 GEMIN2O14893 280 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 CASQ2O14958 399 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 FBXO24O75426 580 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 IL1AP01583 271 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 SSTR5P35346 364 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 PRRX1P54821 245 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 RBM11P57052 281 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 PPP3R1P63098 170 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 RIPK1Q13546 671 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 LTC4SQ16873 150 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 NSUN5P1Q3KNT7 163 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 Q499Y3 187 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 TCTEX1D4Q5JR98 221 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 LYPD6Q86Y78 171 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 OSR2Q8N2R0 312 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 ZNF565Q8N9K5 539 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 OR9G1Q8NH87 305 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 RBM14Q96PK6 669 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 OR14A2Q96R54 314 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 ZNF184Q99676 751 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 BARHL1Q9BZE3 327 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 MMP28Q9H239 520 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 LIN7BQ9HAP6 207 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 PLCXD1Q9NUJ7 323 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 FKBP14Q9NWM8 211 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 IDI2-AS1Q9NZ38 188 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 PSG11Q9UQ72 335 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 HSPE1-MOB4S4R3N1 261 aa8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 PRKDCP78527 4128 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-204ENST00000527253 A0A1W2PPE3 182 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A18PA6NE21 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A16PA6NEW6 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 EFCAB10A6NFE3 127 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A20PA6NIJ5 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A9PA6NNJ1 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A12PA8MX19 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A5PA8MXJ8 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 C15orf65H3BRN8 121 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 J3QR06 171 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 OR7C1O76099 320 aaPredicted RBP8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 OPN1MWP04001 364 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A15PP0C7V4 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A13PP0C7W8 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A14PP0C7W9 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FAM90A24PP0C7X0 464 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 OPN1MW2P0DN77 364 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 OPN1MW3P0DN78 364 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 FSTP19883 344 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 SERPINA2P20848 420 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 BRS3P32247 399 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 KCNJ3P48549 501 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 GP2P55259 537 aaKnown RBP8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 RBM39Q14498 530 aaKnown RBP8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 YIF1BQ5BJH7 314 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 C10orf99Q6UWK7 81 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 AHSA2Q719I0 299 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 C8orf59Q8N0T1 100 aaPredicted RBP8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 DTX3Q8N9I9 347 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 BPIFB6Q8NFQ5 453 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 UBALD1Q8TB05 177 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 TFAP2CQ92754 450 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 MUL1Q969V5 352 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 CPNE2Q96FN4 548 aaPredicted RBP8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 SLC25A33Q9BSK2 321 aa8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 CHCHD3Q9NX63 227 aaKnown RBP8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 CNOT2Q9NZN8 540 aaKnown RBP8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 NKX1-2Q9UD57 310 aaPredicted RBP8.32□□□□□ -1.08
PRPF40B-204ENST00000527253 A0A1W2PPI3 338 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 OR2F2O95006 317 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 MT-ND4P03905 459 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 MAS1P04201 325 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 CD1AP06126 327 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 LPLP06858 475 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 VDAC2P45880 294 aaPredicted RBP8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 GNG10P50151 68 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 CD83Q01151 205 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 INSL4Q14641 139 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 BEAN1Q3B7T3 259 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 SLC22A6Q4U2R8 563 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 ABCA11PQ4W5N1 156 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 SAMD5Q5TGI4 173 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 GLIPR1L1Q6UWM5 242 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 C16orf82Q7Z2V1 217 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 NANOGP1Q8N7R0 232 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 OR5AU1Q8NGC0 362 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 CCDC107Q8WV48 283 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 SGCDQ92629 289 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 DERL3Q96Q80 235 aa8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 MRPS28Q9Y2Q9 187 aaKnown RBP8.31□□□□□ -1.08
PRPF40B-204ENST00000527253 TMEM30CPA0ZSE6 113 aa8.3□□□□□ -1.08
PRPF40B-204ENST00000527253 OOSP1A8MZH6 123 aa8.3□□□□□ -1.08
PRPF40B-204ENST00000527253 CSTBP04080 98 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms