RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 C19orf54Q5BKX5 351 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 CYP2R1Q6VVX0 501 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 LINC00322Q6ZN03 302 aaPredicted RBP12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 UTS2BQ765I0 119 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 MINDY2Q8NBR6 621 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 ARPC1AQ92747 370 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 RASL11BQ9BPW5 248 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 SLC25A19Q9HC21 320 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 GTF2A1LQ9UNN4 478 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 LINC01619G3V211 115 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 SYT7O43581 403 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 CYB5AP00167 134 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 SERPINA3P01011 423 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 ATP6V1B2P21281 511 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 VHLP40337 213 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 F2RL1P55085 397 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 MOB3BQ86TA1 216 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 OR10X1Q8NGY0 326 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 RTN4IP1Q8WWV3 396 aaPredicted RBP12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 EME1Q96AY2 570 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 CNN2Q99439 309 aaKnown RBP12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 ACTR3BQ9P1U1 418 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 KIAA1456Q9P272 454 aa12.46□□□□□ -0.41
CHMP4A-203ENST00000527154 VPS13DQ5THJ4 4388 aa12.46□□□□□ -0.42
CHMP4A-203ENST00000527154 G3V318 75 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 H3BSH0 61 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 OSMP13725 252 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 ZNF44P15621 663 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 C21orf33P30042 268 aaPredicted RBP12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 GLP1RP43220 463 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 REG1BP48304 166 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 ZNF137PP52743 207 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 MTCP1P56278 107 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 RSBN1Q5VWQ0 802 aaPredicted RBP12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 TMEM65Q6PI78 240 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 SATL1Q86VE3 508 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 SAXO1Q8IYX7 474 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 DEFB107AQ8IZN7 70 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 GIPC3Q8TF64 312 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 SPSB1Q96BD6 273 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 OR5B12Q96R08 314 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 ALX4Q9H161 411 aaPredicted RBP12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 HIPK2Q9H2X6 1198 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 ADGRL4Q9HBW9 690 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 KIF25Q9UIL4 384 aa12.45□□□□□ -0.42
CHMP4A-203ENST00000527154 ZNF736B4DX44 427 aaPredicted RBP12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 MT-ND2P03891 347 aa12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 PRKACBP22694 351 aa12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 GNG10P50151 68 aa12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 CRIP2P52943 208 aaPredicted RBP12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 BNIP1Q12981 228 aa12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 DDB2Q92466 427 aa12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 RNF166Q96A37 237 aaPredicted RBP12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 ADAT3Q96EY9 351 aaPredicted RBP12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 TAGLN3Q9UI15 199 aa12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 ZNF107Q9UII5 783 aaPredicted RBP12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 MRPS28Q9Y2Q9 187 aaKnown RBP12.44□□□□□ -0.42
CHMP4A-203ENST00000527154 IGHV4OR15-8A0A075B7B6 117 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 A0A087WW49 117 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 SNX3O60493 162 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 LGALS1P09382 135 aaKnown RBP12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 ATF1P18846 271 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 SSTR5P35346 364 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 EFNB1P98172 346 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 Q3ZCU0 254 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 SSX6Q7RTT6 188 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 SLC35F2Q8IXU6 374 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 OR52M1Q8NGK5 317 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 LRGUKQ96M69 825 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 OR4C12Q96R67 309 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 MBOAT4Q96T53 435 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 NABP2Q9BQ15 211 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 CLN6Q9NWW5 311 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 NDE1Q9NXR1 346 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 STUB1Q9UNE7 303 aa12.43□□□□□ -0.42
CHMP4A-203ENST00000527154 MEIKINA0A087WXM9 373 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 IGHV7-81A0A0B4J1V7 117 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 TRAV24A0A0B4J272 114 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 A0A1W2PPE3 182 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 ATP6V0E1O15342 81 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 SOX15O60248 233 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 HLA-DRB1P01911 266 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 ODF4Q2M2E3 257 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 TMEM236Q5W0B7 351 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 TMEM179BQ7Z7N9 219 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 PRSS35Q8N3Z0 413 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 YIPF7Q8N8F6 280 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 RBMXL1Q96E39 390 aaKnown RBP12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 OPALINQ96PE5 141 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 ARL8BQ9NVJ2 186 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 ING3Q9NXR8 418 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 WSB1Q9Y6I7 421 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 DNAH6Q9C0G6 4158 aa12.42□□□□□ -0.42
CHMP4A-203ENST00000527154 LOC107986453A0A1B0GWG9 222 aa12.41□□□□□ -0.42
CHMP4A-203ENST00000527154 C12orf77C9JDV5 145 aa12.41□□□□□ -0.42
CHMP4A-203ENST00000527154 ZNF670-ZNF695F2Z2N8 137 aa12.41□□□□□ -0.42
CHMP4A-203ENST00000527154 DEGS1O15121 323 aa12.41□□□□□ -0.42
CHMP4A-203ENST00000527154 ARPC1BO15143 372 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms