RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 HTR1AP08908 422 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 OR3A4PP47883 348 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 LUMP51884 338 aaPredicted RBP11.23□□□□□ -0.61
CPSF1-201ENST00000526271 TP53I3Q53FA7 332 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 FAM53AQ6NSI3 398 aaPredicted RBP11.23□□□□□ -0.61
CPSF1-201ENST00000526271 PRSS48Q7RTY5 328 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 NANOGP1Q8N7R0 232 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 ZNF485Q8NCK3 441 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 OR51A4Q8NGJ6 313 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 OR56B4Q8NH76 319 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 ZNF596Q8TC21 504 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 RAX2Q96IS3 184 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 KIRREL1Q96J84 757 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 ISG20L2Q9H9L3 353 aaKnown RBP11.23□□□□□ -0.61
CPSF1-201ENST00000526271 CHCHD3Q9NX63 227 aaKnown RBP11.23□□□□□ -0.61
CPSF1-201ENST00000526271 GSTK1Q9Y2Q3 226 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 MOB4Q9Y3A3 225 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 SORL1Q92673 2214 aa11.23□□□□□ -0.61
CPSF1-201ENST00000526271 GATBO75879 557 aaKnown RBP11.22□□□□□ -0.61
CPSF1-201ENST00000526271 ATF1P18846 271 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 MYL12AP19105 171 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 BRS3P32247 399 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 RBP2P50120 134 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 DEFB136Q30KP8 78 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 KCTD21Q4G0X4 260 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 SPIN3Q5JUX0 258 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 DRAM1Q8N682 238 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 OR5D18Q8NGL1 313 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 OR13A1Q8NGR1 328 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 OR52N1Q8NH53 320 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 CAPSLQ8WWF8 208 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 AKR1E2Q96JD6 320 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 C4orf36Q96KX1 117 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 PRR25Q96S07 402 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 PLEKHA1Q9HB21 404 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 ING3Q9NXR8 418 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 GAR1Q9NY12 217 aaKnown RBP11.22□□□□□ -0.61
CPSF1-201ENST00000526271 FRRS1LQ9P0K9 344 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 U3KQK5 164 aa11.22□□□□□ -0.61
CPSF1-201ENST00000526271 TRGV10A0A0A0MS01 117 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 J3QLW9 94 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 MT-ND2P03891 347 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 CSN2P05814 226 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 ZNF19P17023 458 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 MTCP1P56278 107 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 ZP1P60852 638 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 MRPL28Q13084 256 aaKnown RBP11.21□□□□□ -0.61
CPSF1-201ENST00000526271 ATXN7L3Q14CW9 347 aaPredicted RBP11.21□□□□□ -0.61
CPSF1-201ENST00000526271 OR2G6Q5TZ20 316 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 FDX2Q6P4F2 183 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 TMPRSS11AQ6ZMR5 421 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 UTS2BQ765I0 119 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 THNSL2Q86YJ6 484 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 Q8IYB0 196 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 OR2G2Q8NGZ5 317 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 FGGYQ96C11 551 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 PELI1Q96FA3 418 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 NR1H4Q96RI1 486 aaPredicted RBP11.21□□□□□ -0.61
CPSF1-201ENST00000526271 EXOSC4Q9NPD3 245 aaKnown RBP11.21□□□□□ -0.61
CPSF1-201ENST00000526271 BABAM2Q9NXR7 383 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 SCOCQ9UIL1 159 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 GNG8Q9UK08 70 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 ERGIC3Q9Y282 383 aa11.21□□□□□ -0.61
CPSF1-201ENST00000526271 TRAV39A0A0B4J263 110 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 TRAV24A0A0B4J272 114 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 TNFAIP8O95379 198 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 IGHG2P01859 326 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 MYCNOSP40205 109 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 PTGFRP43088 359 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 ATP1B3P54709 279 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 RBM39Q14498 530 aaKnown RBP11.2□□□□□ -0.62
CPSF1-201ENST00000526271 HNF4GQ14541 408 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 OR52W1Q6IF63 320 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 SPARTQ8N0X7 666 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 Q8N6K4 173 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 KLHL30-AS1Q8NEE0 82 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 HAVCR2Q8TDQ0 301 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 PP6455Q8WZ26 134 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 CYYR1Q96J86 154 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 OPALINQ96PE5 141 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 ASCL2Q99929 193 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 GAL3ST2Q9H3Q3 398 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
CPSF1-201ENST00000526271 LSM2Q9Y333 95 aaKnown RBP11.2□□□□□ -0.62
CPSF1-201ENST00000526271 KBTBD11-OT1A0A1B0GTJ5 212 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 A0A1W2PPE3 182 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 OOSP1A8MZH6 123 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 NPIPB11E5RHQ5 1161 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 E9PI62 339 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 J3QR06 171 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 LALBAP00709 142 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
CPSF1-201ENST00000526271 CCR9P51686 369 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 GBX2P52951 348 aaPredicted RBP11.19□□□□□ -0.62
CPSF1-201ENST00000526271 WNT4P56705 351 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 CFHR3Q02985 330 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 DOC2BQ14184 412 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 KRBOX4Q5JUW0 171 aa11.19□□□□□ -0.62
CPSF1-201ENST00000526271 ZNF773Q6PK81 442 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms