RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TIMM8AO60220 97 aaPredicted RBP3.72□□□□□ -1.81
USP48-211ENST00000526044 GMDSO60547 372 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 GATBO75879 557 aaKnown RBP3.72□□□□□ -1.81
USP48-211ENST00000526044 CST4P01036 141 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 NRASP01111 189 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 RAF1P04049 648 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OCM2P0CE71 109 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OCMP0CE72 109 aaPredicted RBP3.72□□□□□ -1.81
USP48-211ENST00000526044 PAX1P15863 534 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 SRMP19623 302 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 KITLGP21583 273 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 CCL1P22362 96 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 GADD45AP24522 165 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 GABRA5P31644 462 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 BMI1P35226 326 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 TGFBR2P37173 567 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 MPV17P39210 176 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 CRYBB2P43320 205 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 MAGEB1P43366 347 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 RPS11P62280 158 aaKnown RBP eCLIP3.72□□□□□ -1.81
USP48-211ENST00000526044 RPS25P62851 125 aaKnown RBP3.72□□□□□ -1.81
USP48-211ENST00000526044 FABP5Q01469 135 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 TLE4Q04727 773 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 SSX1Q16384 188 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 ALKBH6Q3KRA9 238 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 TIMM50Q3ZCQ8 353 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 AGAP6Q5VW22 663 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 GPR107Q5VW38 600 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 PAMR1Q6UXH9 720 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 TMEM91Q6ZNR0 172 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 GDPGP1Q6ZNW5 385 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 LRP11Q86VZ4 500 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OR5AS1Q8N127 324 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 MUC15Q8N387 334 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 ZNF611Q8N823 705 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 BHLHE23Q8NDY6 225 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OR8G5Q8NG78 346 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OR51A4Q8NGJ6 313 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OR5D14Q8NGL3 314 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OR13F1Q8NGS4 319 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OR13G1Q8NGZ3 307 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OR10AC1Q8NH08 325 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 TSEN15Q8WW01 171 aaKnown RBP3.72□□□□□ -1.81
USP48-211ENST00000526044 PHYHIPQ92561 330 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 MRPL24Q96A35 216 aaKnown RBP3.72□□□□□ -1.81
USP48-211ENST00000526044 YIPF6Q96EC8 236 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 ST6GAL2Q96JF0 529 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 PGLYRP3Q96LB9 341 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 SSX3Q99909 188 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 MRPL37Q9BZE1 423 aaKnown RBP3.72□□□□□ -1.81
USP48-211ENST00000526044 SLC22A4Q9H015 551 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 SLITRK2Q9H156 845 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 OR51E2Q9H255 320 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 PLEKHA1Q9HB21 404 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 NEK6Q9HC98 313 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 EXOSC4Q9NPD3 245 aaKnown RBP3.72□□□□□ -1.81
USP48-211ENST00000526044 FAIMQ9NVQ4 179 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 NDUFB11Q9NX14 153 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 NDUFA13Q9P0J0 144 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 ENPP5Q9UJA9 477 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 STUB1Q9UNE7 303 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 PIGLQ9Y2B2 252 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 RHBDD3Q9Y3P4 386 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 MPC1Q9Y5U8 109 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 KALRNO60229 2985 aa3.72□□□□□ -1.81
USP48-211ENST00000526044 IGLV3-9A0A075B6K5 115 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 LOC100506127A0A0U1RQW1 187 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 ZNF816-ZNF321PA0A0X1KG74 233 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 C13orf42A0A1B0GVH6 325 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 LOC107986453A0A1B0GWG9 222 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 A0A1W2PN81 502 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 ZNF850A8MQ14 1090 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 H0Y8G0 127 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 TMEM178BH3BS89 294 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 K7EQM0 130 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 LGALS8O00214 317 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 GABRPO00591 440 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 AIREO43918 545 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 GPX5O75715 221 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 ARL6IP5O75915 188 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 ERCC1P07992 297 aaPredicted RBP3.71□□□□□ -1.82
USP48-211ENST00000526044 RPA2P15927 270 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 ATF1P18846 271 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 RAB3AP20336 220 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 CA6P23280 308 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 ACKR3P25106 362 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 FGF9P31371 208 aaPredicted RBP3.71□□□□□ -1.82
USP48-211ENST00000526044 CHRNA7P36544 502 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 PSMD7P51665 324 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 PRDX4Q13162 271 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 TNK1Q13470 666 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 INSL4Q14641 139 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 OR8G1Q15617 311 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 OR8B8Q15620 311 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 CEACAM21Q3KPI0 293 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 HSD17B12Q53GQ0 312 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 CLVS2Q5SYC1 327 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 C22orf42Q6IC83 251 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 CD200R1LQ6Q8B3 271 aa3.71□□□□□ -1.82
USP48-211ENST00000526044 GSG1LQ6UXU4 331 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms